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Tests are passing for all test suite (for numpy>2 at least)
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6 files changed

+33
-39
lines changed

6 files changed

+33
-39
lines changed

src/blosc2/__init__.py

Lines changed: 1 addition & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -15,19 +15,13 @@
1515

1616
# Do the platform check once at module level
1717
IS_WASM = platform.machine() == "wasm32"
18-
IS_WASM = True # for testing
18+
IS_WASM = True # for testing (comment this line out for production)
1919
"""
2020
Flag for WebAssembly platform.
2121
"""
2222

2323
if not IS_WASM:
2424
import numexpr
25-
else:
26-
numexpr = None
27-
# try:
28-
# import numexpr
29-
# except ImportError:
30-
# numexpr = None
3125

3226
from .version import __version__
3327

src/blosc2/lazyexpr.py

Lines changed: 9 additions & 11 deletions
Original file line numberDiff line numberDiff line change
@@ -40,15 +40,20 @@
4040

4141
# Import numexpr only if not running in WebAssembly
4242
if not blosc2.IS_WASM:
43-
import numexpr as ne
44-
else:
45-
ne = None
43+
import numexpr
4644

4745

4846
def ne_evaluate(expression, local_dict=None, **kwargs):
4947
"""Safely evaluate expressions using numexpr when possible, falling back to numpy."""
5048
if local_dict is None:
5149
local_dict = {}
50+
# Get local vars dict from the stack frame
51+
_frame_depth = kwargs.pop("_frame_depth", 1)
52+
local_dict |= {
53+
k: v
54+
for k, v in dict(sys._getframe(_frame_depth).f_locals).items()
55+
if hasattr(v, "shape") or np.isscalar(v)
56+
}
5257
if blosc2.IS_WASM:
5358
# Use numpy eval when running in WebAssembly
5459
safe_globals = {"np": np}
@@ -60,19 +65,12 @@ def ne_evaluate(expression, local_dict=None, **kwargs):
6065
if callable(getattr(np, name)) and not name.startswith("_")
6166
}
6267
)
63-
# Get local vars dict from the stack frame
64-
_frame_depth = kwargs.pop("_frame_depth", 1)
65-
local_dict |= {
66-
k: v
67-
for k, v in dict(sys._getframe(_frame_depth).f_locals).items()
68-
if hasattr(v, "dtype") or np.isscalar(v)
69-
}
7068
if "out" in kwargs:
7169
out = kwargs.pop("out")
7270
out[:] = eval(expression, safe_globals, local_dict)
7371
return out
7472
return eval(expression, safe_globals, local_dict)
75-
return ne.evaluate(expression, local_dict=local_dict, **kwargs)
73+
return numexpr.evaluate(expression, local_dict=local_dict, **kwargs)
7674

7775

7876
# All the dtypes that are supported by the expression evaluator

tests/ndarray/test_c2array_expr.py

Lines changed: 12 additions & 12 deletions
Original file line numberDiff line numberDiff line change
@@ -7,11 +7,11 @@
77
#######################################################################
88
import pathlib
99

10-
import numexpr as ne
1110
import numpy as np
1211
import pytest
1312

1413
import blosc2
14+
from blosc2.lazyexpr import ne_evaluate
1515

1616
pytestmark = pytest.mark.network
1717

@@ -58,7 +58,7 @@ def test_simple(chunks_blocks, c2sub_context):
5858
# Slice
5959
sl = slice(10)
6060
expr = a1 + a3
61-
nres = ne.evaluate("na1 + na3")
61+
nres = ne_evaluate("na1 + na3")
6262
res = expr.compute(item=sl)
6363
np.testing.assert_allclose(res[:], nres[sl])
6464

@@ -72,7 +72,7 @@ def test_simple_getitem(c2sub_context):
7272
chunks_blocks = "default"
7373
a1, a2, a3, a4, na1, na2, na3, na4 = get_arrays(shape, chunks_blocks)
7474
expr = a1 + a2 - a3 * a4
75-
nres = ne.evaluate("na1 + na2 - na3 * na4")
75+
nres = ne_evaluate("na1 + na2 - na3 * na4")
7676

7777
# slice
7878
sl = slice(10)
@@ -99,7 +99,7 @@ def test_ixxx(chunks_blocks, c2sub_context):
9999
expr /= 7 # __itruediv__
100100
expr **= 2.3 # __ipow__
101101
res = expr.compute()
102-
nres = ne.evaluate("(((na1 ** 3 + na2 ** 2 + na3 ** 3 - na4 + 3) + 5) / 7) ** 2.3")
102+
nres = ne_evaluate("(((na1 ** 3 + na2 ** 2 + na3 ** 3 - na4 + 3) + 5) / 7) ** 2.3")
103103
np.testing.assert_allclose(res[:], nres)
104104

105105

@@ -109,7 +109,7 @@ def test_complex(c2sub_context):
109109
a1, a2, a3, a4, na1, na2, na3, na4 = get_arrays(shape, chunks_blocks)
110110
expr = blosc2.tan(a1) * blosc2.sin(a2) + (blosc2.sqrt(a4) * 2)
111111
expr += 2
112-
nres = ne.evaluate("tan(na1) * sin(na2) + (sqrt(na4) * 2) + 2")
112+
nres = ne_evaluate("tan(na1) * sin(na2) + (sqrt(na4) * 2) + 2")
113113
# eval
114114
res = expr.compute()
115115
np.testing.assert_allclose(res[:], nres)
@@ -139,30 +139,30 @@ def test_mix_operands(chunks_blocks, c2sub_context):
139139
b3 = blosc2.asarray(na3, chunks=a3.chunks, blocks=a3.blocks)
140140

141141
expr = a1 + b1
142-
nres = ne.evaluate("na1 + na1")
142+
nres = ne_evaluate("na1 + na1")
143143
np.testing.assert_allclose(expr[:], nres)
144144
np.testing.assert_allclose(expr.compute()[:], nres)
145145

146146
expr = a1 + b3
147-
nres = ne.evaluate("na1 + na3")
147+
nres = ne_evaluate("na1 + na3")
148148
np.testing.assert_allclose(expr[:], nres)
149149
np.testing.assert_allclose(expr.compute()[:], nres)
150150

151151
expr = a1 + b1 + a2 + b3
152-
nres = ne.evaluate("na1 + na1 + na2 + na3")
152+
nres = ne_evaluate("na1 + na1 + na2 + na3")
153153
np.testing.assert_allclose(expr[:], nres)
154154
np.testing.assert_allclose(expr.compute()[:], nres)
155155

156156
expr = a1 + a2 + b1 + b3
157-
nres = ne.evaluate("na1 + na2 + na1 + na3")
157+
nres = ne_evaluate("na1 + na2 + na1 + na3")
158158
np.testing.assert_allclose(expr[:], nres)
159159
np.testing.assert_allclose(expr.compute()[:], nres)
160160

161161
# TODO: fix this
162162
# expr = a1 + na1 * b3
163163
# print(type(expr))
164164
# print("expression: ", expr.expression)
165-
# nres = ne.evaluate("na1 + na1 * na3")
165+
# nres = ne_evaluate("na1 + na1 * na3")
166166
# np.testing.assert_allclose(expr[:], nres)
167167
# np.testing.assert_allclose(expr.compute()[:], nres)
168168

@@ -174,7 +174,7 @@ def test_save(c2sub_context):
174174
a1, a2, a3, a4, na1, na2, na3, na4 = get_arrays(shape, (False, True))
175175

176176
expr = a1 * a2 + a3 - a4 * 3
177-
nres = ne.evaluate("na1 * na2 + na3 - na4 * 3")
177+
nres = ne_evaluate("na1 * na2 + na3 - na4 * 3")
178178

179179
res = expr.compute()
180180
assert res.dtype == np.float64
@@ -235,7 +235,7 @@ def test_broadcasting(broadcast_fixture):
235235
assert expr2.shape == np.broadcast_shapes(a1.shape, a2.shape)
236236
expr = expr1 - expr2
237237
assert expr.shape == np.broadcast_shapes(a1.shape, a2.shape)
238-
nres = ne.evaluate("na1 + na2 - (na1 * na2 + 1)")
238+
nres = ne_evaluate("na1 + na2 - (na1 * na2 + 1)")
239239
res = expr.compute()
240240
np.testing.assert_allclose(res[:], nres)
241241
res = expr[:]

tests/ndarray/test_c2array_reductions.py

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -7,11 +7,11 @@
77
#######################################################################
88
import pathlib
99

10-
import numexpr as ne
1110
import numpy as np
1211
import pytest
1312

1413
import blosc2
14+
from blosc2.lazyexpr import ne_evaluate
1515

1616
pytestmark = pytest.mark.network
1717

@@ -50,7 +50,7 @@ def test_reduce_bool(reduce_op, c2sub_context):
5050
chunks_blocks = "default"
5151
a1, a2, a3, a4, na1, na2, na3, na4 = get_arrays(shape, chunks_blocks)
5252
expr = a1 + a2 > a3 * a4
53-
nres = ne.evaluate("na1 + na2 > na3 * na4")
53+
nres = ne_evaluate("na1 + na2 > na3 * na4")
5454
res = getattr(expr, reduce_op)()
5555
nres = getattr(nres, reduce_op)()
5656
tol = 1e-15 if a1.dtype == "float64" else 1e-6
@@ -105,7 +105,7 @@ def test_reduce_params(chunks_blocks, axis, keepdims, dtype_out, reduce_op, c2su
105105

106106

107107
# TODO: "any" and "all" are not supported yet because:
108-
# ne.evaluate('(o0 + o1)', local_dict = {'o0': np.array(True), 'o1': np.array(True)})
108+
# ne_evaluate('(o0 + o1)', local_dict = {'o0': np.array(True), 'o1': np.array(True)})
109109
# is not supported by NumExpr
110110
@pytest.mark.parametrize(
111111
"chunks_blocks",

tests/ndarray/test_evaluate.py

Lines changed: 6 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -6,11 +6,11 @@
66
# LICENSE file in the root directory of this source tree)
77
#######################################################################
88

9-
import numexpr as ne
109
import numpy as np
1110
import pytest
1211

1312
import blosc2
13+
from blosc2.lazyexpr import ne_evaluate
1414

1515
###### General expressions
1616

@@ -34,25 +34,27 @@ def sample_data(request):
3434
def test_expr(sample_data):
3535
a, b, c, shape = sample_data
3636
d_blosc2 = blosc2.evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)")
37-
d_numexpr = ne.evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)")
37+
d_numexpr = ne_evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)")
3838
np.testing.assert_equal(d_blosc2, d_numexpr)
3939

4040

41+
# skip this test for WASM for now
42+
@pytest.mark.skipif(blosc2.IS_WASM, reason="Skip test for WASM")
4143
def test_expr_out(sample_data):
4244
a, b, c, shape = sample_data
4345
# Testing with an out param
4446
out = blosc2.zeros(shape, dtype="bool")
4547
d_blosc2 = blosc2.evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)", out=out)
4648
out2 = np.zeros(shape, dtype=np.bool_)
47-
d_numexpr = ne.evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)", out=out2)
49+
d_numexpr = ne_evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)", out=out2)
4850
np.testing.assert_equal(d_blosc2, d_numexpr)
4951
np.testing.assert_equal(out, out2)
5052

5153

5254
def test_expr_optimization(sample_data):
5355
a, b, c, shape = sample_data
5456
d_blosc2 = blosc2.evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)", optimization="none")
55-
d_numexpr = ne.evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)", optimization="none")
57+
d_numexpr = ne_evaluate("((a**3 + sin(a * 2)) < c) & (b > 0)", optimization="none")
5658
np.testing.assert_equal(d_blosc2, d_numexpr)
5759

5860

tests/ndarray/test_proxy_expr.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -7,11 +7,11 @@
77
#######################################################################
88
import pathlib
99

10-
import numexpr as ne
1110
import numpy as np
1211
import pytest
1312

1413
import blosc2
14+
from blosc2.lazyexpr import ne_evaluate
1515

1616
pytestmark = pytest.mark.network
1717

@@ -68,7 +68,7 @@ def test_expr_proxy_operands(chunks_blocks, c2sub_context):
6868
sl = slice(10)
6969
expr = a1 + a2 + a3 + a4
7070
expr += 3
71-
nres = ne.evaluate("na1 + na2 + na3 + na4 + 3")
71+
nres = ne_evaluate("na1 + na2 + na3 + na4 + 3")
7272
res = expr.compute(item=sl)
7373
np.testing.assert_allclose(res[:], nres[sl])
7474

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