Removed unused schemas in commons (#23)

Removed unused schemas in commons:
- activitywithprotocol: the hadProtocolValueShape is embeded in commons/protocol
 - experiment
 - measurement

Removed target declarations in commons for:
 - person
 - organization

Author: MFSY

modules/atlas/src/main/resources/schemas/neurosciencegraph/atlas/atlasconstruction/v0.1.0.json

@@ -6,7 +6,7 @@
     }
   ],
   "imports": [
-    "{{base}}/schemas/neurosciencegraph/commons/activitywithprotocol/v0.1.0",
+    "{{base}}/schemas/neurosciencegraph/commons/activity/v0.1.0",
     "{{base}}/schemas/neurosciencegraph/commons/typedlabeledontologyterm/v0.1.0"
   ],
   "@type": "nxv:Schema",
@@ -19,7 +19,7 @@
       "targetClass": "nsg:AtlasConstruction",
       "and": [
         {
-          "node": "{{base}}/schemas/neurosciencegraph/commons/activitywithprotocol/v0.1.0/shapes/ActivityShape"
+          "node": "{{base}}/schemas/neurosciencegraph/commons/activity/v0.1.0/shapes/ActivityShape"
         },
         {
           "property": [

modules/atlas/src/test/resources/data/neurosciencegraph/atlas/atlasconstruction/v0.1.0/all-fields-generated.json

@@ -7,26 +7,30 @@
   "generated": [
     {
       "@type": [
-        "nsg:ParcellationImageData"
+        "nsg:ParcellationImageData",
+        "prov:Entity"
       ],
       "@id": "{{base}}/data/neurosciencegraph/atlas/parcellationimagedata/v0.1.21/fd80b57a-9333-4aa2-9d59-7f7dd3a25a92"
     },
     {
       "@type": [
-        "nsg:ParcellationLabel"
+        "nsg:ParcellationLabel",
+        "prov:Entity"
       ],
       "@id": "{{base}}/data/neurosciencegraph/atlas/parcellationlabel/v0.1.0/cf43d997-b012-486f-bd4b-1b2cc70b3454"
     },
     {
       "@type": [
-        "nsg:TemplateImageData"
+        "nsg:TemplateImageData",
+        "prov:Entity"
       ],
       "@id": "{{base}}/data/neurosciencegraph/atlas/templateimagedata/v0.1.0/df43d997-b012-486f-bd4b-1b2cc70b3454"
     }
   ],
   "used": {
     "@type": [
-      "nsg:Collection"
+      "nsg:Collection",
+      "prov:Entity"
     ],
     "@id": "{{base}}/data/neurosciencegraph/experiment/subjectcollection/v0.1.0/5fdad89d-bb70-40f3-a5ea-cd2555395b7d"
   }

modules/atlas/src/test/resources/data/neurosciencegraph/atlas/atlasconstruction/v0.1.0/min-fields.json

@@ -7,13 +7,15 @@
   "generated": [
     {
       "@type": [
-        "nsg:ParcellationImageData"
+        "nsg:ParcellationImageData",
+        "prov:Entity"
       ],
       "@id": "{{base}}/data/neurosciencegraph/atlas/parcellationimagedata/v0.1.21/fd80b57a-9333-4aa2-9d59-7f7dd3a25a92"
     },
     {
       "@type": [
-        "nsg:ParcellationLabel"
+        "nsg:ParcellationLabel",
+        "prov:Entity"
       ],
       "@id": "{{base}}/data/neurosciencegraph/atlas/parcellationlabel/v0.1.0/cf43d997-b012-486f-bd4b-1b2cc70b3454"
     }

modules/commons/src/main/resources/schemas/neurosciencegraph/commons/activitywithprotocol/v0.1.0.json

@@ -20,7 +20,6 @@
         "http://schema.org/Organization",
         "https://www.grid.ac"
       ],
-      "targetClass": "nsg:Organization",
       "nodeKind": "sh:BlankNodeOrIRI",
       "and": [
         {

modules/commons/src/main/resources/schemas/neurosciencegraph/commons/experiment/v0.1.0.json

@@ -16,7 +16,6 @@
       "@id": "this:PersonShape",
       "@type": "sh:NodeShape",
       "label": "Schema.org person specification is used as a vocabulary to describe a person.",
-      "targetClass": "nsg:Person",
       "nodeKind": "sh:BlankNodeOrIRI",
       "and": [
         {

modules/commons/src/main/resources/schemas/neurosciencegraph/commons/measurement/v0.1.0.json

@@ -64,10 +64,10 @@
         {
           "property": [
             {
-              "path": "schema:repetions",
+              "path": "schema:repetitions",
               "name": "Repetitions",
               "description": "Number of repetitions of an activity (a measurement for example).",
-              "or": [
+              "xone": [
                 {
                   "datatype": "xsd:integer"
                 },

modules/commons/src/main/resources/schemas/neurosciencegraph/commons/organization/v0.1.0.json

@@ -72,7 +72,7 @@
               "path": "nsg:measuredHoldingPotential",
               "name": "Measured holding potential",
               "description": "Measured holding potential of patched cell.",
-              "node": "{{base}}/schemas/neurosciencegraph/commons/quantitativevalue/v0.1.0/shapes/RepeatedQuantitativeMeasurementShape",
+              "node": "{{base}}/schemas/neurosciencegraph/commons/quantitativevalue/v0.1.0/shapes/RepeatedQuantitativeValueShape",
               "maxCount": 1
             },
             {