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python311Packages.pytensor: 2.18.6 -> 2.20.0 #294574

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Merged
merged 2 commits into from
Apr 30, 2024
Merged

python311Packages.pytensor: 2.18.6 -> 2.20.0 #294574

merged 2 commits into from
Apr 30, 2024

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GaetanLepage
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@GaetanLepage GaetanLepage commented Mar 9, 2024 •
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Description of changes

Changelogs:

cc @bcdarwin

Things done

  • Built on platform(s)
    • x86_64-linux
    • aarch64-linux
    • x86_64-darwin
    • aarch64-darwin
  • For non-Linux: Is sandboxing enabled in nix.conf? (See Nix manual)
    • sandbox = relaxed
    • sandbox = true
  • Tested, as applicable:
  • Tested compilation of all packages that depend on this change using nix-shell -p nixpkgs-review --run "nixpkgs-review rev HEAD". Note: all changes have to be committed, also see nixpkgs-review usage
  • Tested basic functionality of all binary files (usually in ./result/bin/)
  • 24.05 Release Notes (or backporting 23.05 and 23.11 Release notes)
    • (Package updates) Added a release notes entry if the change is major or breaking
    • (Module updates) Added a release notes entry if the change is significant
    • (Module addition) Added a release notes entry if adding a new NixOS module
  • Fits CONTRIBUTING.md.

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@github-actions github-actions bot added the 6.topic: python Python is a high-level, general-purpose programming language. label Mar 9, 2024
@ofborg ofborg bot requested a review from bcdarwin March 9, 2024 21:50
@ofborg ofborg bot added 10.rebuild-darwin: 0 This PR does not cause any packages to rebuild on Darwin. 10.rebuild-linux: 1-10 This PR causes between 1 and 10 packages to rebuild on Linux. labels Mar 9, 2024
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Result of nixpkgs-review pr 294574 run on aarch64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python311Packages.pymc
  • python311Packages.pymc.dist
2 packages built:
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on x86_64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python311Packages.pymc
  • python311Packages.pymc.dist
2 packages built:
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage
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Let's wait for pymc to work with this new version of pytensor:

Checking runtime dependencies for pymc-5.10.4-py3-none-any.whl
  - pytensor<2.19,>=2.18.1 not satisfied by version 2.19.0

@GaetanLepage GaetanLepage marked this pull request as draft March 17, 2024 13:20
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Let's wait for pymc to work with this new version of pytensor:

Happening in pymc-devs/pymc#7203

@GaetanLepage GaetanLepage marked this pull request as ready for review March 29, 2024 12:04
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Result of nixpkgs-review pr 294574 run on x86_64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python312Packages.pytensor
  • python312Packages.pytensor.dist
4 packages built:
  • python311Packages.pymc
  • python311Packages.pymc.dist
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@ofborg ofborg bot requested a review from nidabdella March 29, 2024 12:27
@GaetanLepage
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Result of nixpkgs-review pr 294574 run on x86_64-linux 1

2 packages failed to build:
  • python312Packages.pytensor
  • python312Packages.pytensor.dist
6 packages built:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python311Packages.pymc
  • python311Packages.pymc.dist
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage
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python312Packages.pytensor is also broken on master because its dependency python312Packages.numba-scipy fails to build.
cc @Etjean

@GaetanLepage GaetanLepage changed the title python311Packages.pytensor: 2.18.6 -> 2.19.0 python311Packages.pytensor: 2.18.6 -> 2.20.0 Apr 9, 2024
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Result of nixpkgs-review pr 294574 run on aarch64-darwin 1

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on x86_64-darwin 1

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on aarch64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python312Packages.pytensor
  • python312Packages.pytensor.dist
4 packages built:
  • python311Packages.pymc
  • python311Packages.pymc.dist
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on x86_64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python312Packages.pytensor
  • python312Packages.pytensor.dist
4 packages built:
  • python311Packages.pymc
  • python311Packages.pymc.dist
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage GaetanLepage requested a review from NickCao April 9, 2024 21:09
@GaetanLepage GaetanLepage force-pushed the pytensor branch 2 times, most recently from 9d85cfb to 7055567 Compare April 16, 2024 13:32
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Result of nixpkgs-review pr 294574 run on aarch64-darwin 1

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on x86_64-darwin 1

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on aarch64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python312Packages.pytensor
  • python312Packages.pytensor.dist
4 packages built:
  • python311Packages.pymc
  • python311Packages.pymc.dist
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage
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Result of nixpkgs-review pr 294574 run on x86_64-linux 1

4 packages failed to build:
  • python311Packages.bambi
  • python311Packages.bambi.dist
  • python312Packages.pytensor
  • python312Packages.pytensor.dist
4 packages built:
  • python311Packages.pymc
  • python311Packages.pymc.dist
  • python311Packages.pytensor
  • python311Packages.pytensor.dist

@GaetanLepage GaetanLepage mentioned this pull request Apr 29, 2024
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python311Packages.bambi's tests fail with:

=========================== short test summary info ============================
FAILED tests/test_built_models.py::test_ordinal_families[sratio-logit] - TypeError: 'NoneType' object cannot be interpreted as an integer
FAILED tests/test_built_models.py::test_ordinal_families[sratio-probit] - TypeError: 'NoneType' object cannot be interpreted as an integer
FAILED tests/test_built_models.py::test_ordinal_families[sratio-cloglog] - TypeError: 'NoneType' object cannot be interpreted as an integer
FAILED tests/test_model_construction.py::test_categorical_term - ValueError: Size length is incompatible with batched dimensions of paramete...
FAILED tests/test_model_construction.py::test_1d_group_specific - ValueError: Size length is incompatible with batched dimensions of paramete...
= 5 failed, 145 passed, 2 skipped, 99 deselected, 203 warnings in 1908.93s (0:31:48) =

@pbsds pbsds merged commit f1b03bc into NixOS:master Apr 30, 2024
@GaetanLepage GaetanLepage deleted the pytensor branch April 30, 2024 14:28
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