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Version 1.5.0 #193

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@caetera caetera commented Mar 20, 2025 •
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Preparation for release 1.5.0

Changes

  • Code is fully migrated to .NET 8, thus, Mono dependency is obsolete
  • Added an action for automatic building and testing on all code changes
  • Added an action to produce self-contained and framework-based binaries for all major platforms on release
  • Parquet format is updated to version 0.2
  • Charge state array can be included in mzML and MGF output. (Close include charge state array #189)

caetera and others added 18 commits October 18, 2024 19:55
@caetera
Switching to Net 8.0
ea42660 
Known issues:
Parquet needs refactoring - new API
AWS S3 needs testing
Tests cannot be executed
@caetera
Tests updated to the latest NUnit
df89589
@caetera
Fix logging and mzML
95c7e22 
* Log4net configuration moved to App.config
* Fixed unhandled exception during mzML precursor creation
* Explicit usings
* Properties (some build/debug information from VS) ignored

TODO Check all "possibly null reference" warnings
@lazear
feat: writer for mz_parquet v0.2 format
3b497a9
@caetera
Implement ion charges
6ee904c
@caetera
Convert AssemblyInfo to project properties
2009886
@caetera
Unified output path resolution
14afbf6
@caetera
Precursor logic streamlined
a26a5ab 
The same precursor selection logic as for other file formats
TBD: Move some of the service functions to the SpectrumWriter base class
@caetera
Unified mass spectrometry data
5d955be 
Use the same method for mass-spec data creation
@caetera
MS level filter and progress
8d880ad
@caetera
Move PrecursorTree to general SpectrumWriter
1e9b500
@caetera
Test for ParquetWriter
5021515
@caetera
Precursor scan fix for MS level restricted files
1ef4d88
@caetera
Merge pull request #192
01cd3af 
mzParquet writer v0.2 full implementation
@caetera
Added build and test action
e23f499
@caetera
Action to add artifacts on release
4aa8111
@caetera
Update Readme
bf2f02f
@caetera
Tidying
adfc246
@caetera caetera requested a review from ypriverol March 20, 2025 14:27
@ypriverol ypriverol mentioned this pull request Mar 22, 2025
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@ypriverol ypriverol linked an issue Mar 24, 2025 that may be closed by this pull request
v1.3.3 Fails Compilation on Linux #110
Open
@caetera caetera mentioned this pull request Mar 24, 2025
Open
@caetera caetera mentioned this pull request Apr 9, 2025
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@ypriverol ypriverol Awaiting requested review from ypriverol

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include charge state array v1.3.3 Fails Compilation on Linux
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@caetera @lazear