MNT split the actions to run tests and tutorials (#36)

* MNT split the actions to run tests and tutorials

* Simplify actions more

* Install git-annex for datalad

* Check if the tutorial data is cached for tests too

Author: mvdoc

.github/workflows/run_tests.yml

@@ -73,14 +73,4 @@ jobs:
         fail_ci_if_error: true
         token: ${{ secrets.CODECOV_TOKEN }}
         verbose: false
-
-    - name: Run some tutorials
-      run: |
-        # run tutorials with a shortcut option to skip model fitting
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/00_download_shortclips.py
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/01_plot_explainable_variance.py
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/02_plot_ridge_regression.py
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/03_plot_wordnet_model.py
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/04_plot_hemodynamic_response.py
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/05_plot_motion_energy_model.py
-        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/06_plot_banded_ridge_model.py
+ 

.github/workflows/run_tutorials.yml

@@ -0,0 +1,64 @@
+name: Tutorials
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+
+jobs:
+  run-tutorials:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: [3.9, "3.10", "3.11", "3.12", "3.13"]
+      max-parallel: 5
+      fail-fast: true
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: ${{ matrix.python-version }}
+
+    - uses: actions/cache@v4
+      with:
+        path: ~/.cache/pip
+        key: ${{ runner.os }}-pip-${{ hashFiles('**/setup.py') }}
+        restore-keys: |
+          ${{ runner.os }}-pip-
+
+    - uses: actions/cache@v4
+      with:
+        path: ~/voxelwise_tutorials_data/shortclips
+        key: shortclips-dataset
+
+    - name: Install dependencies
+      run: |
+        pip install -U setuptools
+        pip install -U wheel
+        # install himalaya from source to get early testing
+        pip install git+https://github.com/gallantlab/himalaya.git
+        pip install -e ."[github]"
+        # use neurodebian installer for travis
+        bash <(wget -q -O- http://neuro.debian.net/_files/neurodebian-travis.sh)
+        sudo apt-get update -qq
+        sudo apt-get install git-annex-standalone
+
+    - name: Config git-annex
+      run: |
+        # add some git config for git-annex
+        git config --global user.email "[email protected]"
+        git config --global user.name "Github Actions"
+
+    - name: Run some tutorials
+      run: |
+        # run tutorials with a shortcut option to skip model fitting
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/00_download_shortclips.py
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/01_plot_explainable_variance.py
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/02_plot_ridge_regression.py
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/03_plot_wordnet_model.py
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/04_plot_hemodynamic_response.py
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/05_plot_motion_energy_model.py
+        HIMALAYA_SKIP_FIT=True python tutorials/shortclips/06_plot_banded_ridge_model.py