gzip compression of temp fastq files and replaced nanofilt with chopper #356
atrull314Annotations
1 error and 2 warnings
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Run pipeline with test data (latest-everything | test | docker)
Process completed with exit code 1.
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Run pipeline with test data (latest-everything | test | docker)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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Run pipeline with test data (24.04.2 | test | docker)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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