Commit ebe0dd0
CFTimeIndex (#1252)
* Start on implementing and testing NetCDFTimeIndex
* TST Move to using pytest fixtures to structure tests
* Address initial review comments
* Address second round of review comments
* Fix failing python3 tests
* Match test method name to method name
* First attempts at integrating NetCDFTimeIndex into xarray
This is a first pass at the following:
- Resetting the logic for decoding datetimes such that `np.datetime64` objects
are never used for non-standard calendars
- Adding logic to use a `NetCDFTimeIndex` whenever `netcdftime.datetime`
objects are used in an array being cast as an index (so if one reads in a
Dataset from a netCDF file or creates one in Python, which is indexed by a time
coordinate that uses `netcdftime.datetime` objects a NetCDFTimeIndex will be
used rather than a generic object-based index)
- Adding logic to encode `netcdftime.datetime` objects when saving out to
netCDF files
* Cleanup
* Fix DataFrame and Series test failures for NetCDFTimeIndex
These were related to a recent minor upstream change in pandas:
https://github.com/pandas-dev/pandas/blame/master/pandas/core/indexing.py#L1433
* First pass at making NetCDFTimeIndex compatible with #1356
* Address initial review comments
* Restore test_conventions.py
* Fix failing test in test_utils.py
* flake8
* Update for standalone netcdftime
* Address stickler-ci comments
* Skip test_format_netcdftime_datetime if netcdftime not installed
* A start on documentation
* Fix failing zarr tests related to netcdftime encoding
* Simplify test_decode_standard_calendar_single_element_non_ns_range
* Address a couple review comments
* Use else clause in _maybe_cast_to_netcdftimeindex
* Start on adding enable_netcdftimeindex option
* Continue parametrizing tests in test_coding_times.py
* Update time-series.rst for enable_netcdftimeindex option
* Use :py:func: in rst for xarray.set_options
* Add a what's new entry and test that resample raises a TypeError
* Move what's new entry to the version 0.10.3 section
* Add version-dependent pathway for importing netcdftime.datetime
* Make NetCDFTimeIndex and date decoding/encoding compatible with datetime.datetime
* Remove logic to make NetCDFTimeIndex compatible with datetime.datetime
* Documentation edits
* Ensure proper enable_netcdftimeindex option is used under lazy decoding
Prior to this, opening a dataset with enable_netcdftimeindex set to True
and then accessing one of its variables outside the context manager would
lead to it being decoded with the default enable_netcdftimeindex
(which is False). This makes sure that lazy decoding takes into account
the context under which it was called.
* Add fix and test for concatenating variables with a NetCDFTimeIndex
Previously when concatenating variables indexed by a NetCDFTimeIndex
the index would be wrongly converted to a generic pd.Index
* Further namespace changes due to netcdftime/cftime renaming
* NetCDFTimeIndex -> CFTimeIndex
* Documentation updates
* Only allow use of CFTimeIndex when using the standalone cftime
Also only allow for serialization of cftime.datetime objects when
using the standalone cftime package.
* Fix errant what's new changes
* flake8
* Fix skip logic in test_cftimeindex.py
* Use only_use_cftime_datetimes option in num2date
* Require standalone cftime library for all new functionality
Add tests/fixes for dt accessor with cftime datetimes
* Improve skipping logic in test_cftimeindex.py
* Fix skipping logic in test_cftimeindex.py for when cftime or netcdftime
are not available. Use existing requires_cftime decorator where possible
(i.e. only on tests that are not parametrized via pytest.mark.parametrize)
* Fix skip logic in Python 3.4 build for test_cftimeindex.py
* Improve error messages when for when the standalone cftime is not installed
* Tweak skip logic in test_accessors.py
* flake8
* Address review comments
* Temporarily remove cftime from py27 build environment on windows
* flake8
* Install cftime via pip for Python 2.7 on Windows
* flake8
* Remove unnecessary new lines; simplify _maybe_cast_to_cftimeindex
* Restore test case for #2002 in test_coding_times.py
I must have inadvertently removed it during a merge.
* Tweak dates out of range warning logic slightly to preserve current default
* Address review comments1 parent 2c6bd2d commit ebe0dd0
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