Merge branch 'main' into networkx-incorrect-SupportsGetItem

Author: Avasam

stubs/networkx/networkx/algorithms/planarity.pyi

@@ -1,8 +1,9 @@
-from _typeshed import Incomplete
-from collections.abc import Generator, Mapping, MutableSet, Reversible
+from _typeshed import Incomplete, Unused
+from collections.abc import Generator, Iterable, Mapping, MutableSet, Reversible
+from typing import NoReturn
 
 from networkx.classes.digraph import DiGraph
-from networkx.classes.graph import Graph, _Node
+from networkx.classes.graph import Graph, _EdgePlus, _Node
 from networkx.utils.backends import _dispatchable
 
 __all__ = ["check_planarity", "is_planar", "PlanarEmbedding"]
@@ -87,6 +88,9 @@ class LRPlanarity:
     def sign(self, e): ...
     def sign_recursive(self, e): ...
 
+# NOTE: Graph subclasses relationships are so complex
+# we're only overriding methods that differ in signature from the base classes
+# to use inheritance to our advantage and reduce complexity
 class PlanarEmbedding(DiGraph[_Node]):
     def get_data(self) -> dict[_Node, list[_Node]]: ...
     def set_data(self, data: Mapping[_Node, Reversible[_Node]]) -> None: ...
@@ -101,4 +105,9 @@ class PlanarEmbedding(DiGraph[_Node]):
     def traverse_face(
         self, v: _Node, w: _Node, mark_half_edges: MutableSet[tuple[_Node, _Node]] | None = None
     ) -> list[_Node]: ...
-    def to_undirected(self, reciprocal: bool = False, as_view: bool = False) -> Graph[_Node]: ...  # type: ignore[override]
+    # Overriden in __init__ to always raise
+    def add_edge(self, u_of_edge: _Node, v_of_edge: _Node, **attr: Unused) -> NoReturn: ...
+    def add_edges_from(self, ebunch_to_add: Iterable[_EdgePlus[_Node]], **attr: Unused) -> NoReturn: ...
+    def add_weighted_edges_from(
+        self, ebunch_to_add: Iterable[tuple[_Node, _Node, float]], weight: str = "weight", **attr: Unused
+    ) -> NoReturn: ...

stubs/networkx/networkx/classes/digraph.pyi

@@ -10,13 +10,17 @@ from networkx.classes.reportviews import (
     InDegreeView,
     InEdgeView,
     InMultiDegreeView,
+    InMultiEdgeView,
     OutDegreeView,
     OutEdgeView,
     OutMultiDegreeView,
 )
 
 __all__ = ["DiGraph"]
 
+# NOTE: Graph subclasses relationships are so complex
+# we're only overriding methods that differ in signature from the base classes
+# to use inheritance to our advantage and reduce complexity
 class DiGraph(Graph[_Node]):
     @cached_property
     def succ(self) -> AdjacencyView[_Node, _Node, dict[str, Any]]: ...
@@ -30,17 +34,19 @@ class DiGraph(Graph[_Node]):
 
     def predecessors(self, n: _Node) -> Iterator[_Node]: ...
     @cached_property
+    def edges(self) -> OutEdgeView[_Node]: ...
+    @cached_property
     def out_edges(self) -> OutEdgeView[_Node]: ...
     @cached_property
-    def in_edges(self) -> InEdgeView[_Node]: ...
+    # Including subtypes' possible return types for LSP
+    def in_edges(self) -> InEdgeView[_Node] | InMultiEdgeView[_Node]: ...
+    @cached_property
+    def degree(self) -> DiDegreeView[_Node]: ...
     @cached_property
+    # Including subtypes' possible return types for LSP
     def in_degree(self) -> InDegreeView[_Node] | InMultiDegreeView[_Node]: ...
     @cached_property
+    # Including subtypes' possible return types for LSP
     def out_degree(self) -> OutDegreeView[_Node] | OutMultiDegreeView[_Node]: ...
-    def to_undirected(self, reciprocal: bool = False, as_view: bool = False) -> Graph[_Node]: ...  # type: ignore[override]
-    # reciprocal : If True, only edges that appear in both directions ... will be kept in the undirected graph.
+    def to_undirected(self, reciprocal: bool = False, as_view: bool = False) -> Graph[_Node]: ...  # type: ignore[override] # Has an additional `reciprocal` keyword argument
     def reverse(self, copy: bool = True) -> Self: ...
-    @cached_property
-    def edges(self) -> OutEdgeView[_Node]: ...  # type: ignore[override] # An OutEdgeView of the DiGraph as G.edges or G.edges().
-    @cached_property
-    def degree(self) -> int | DiDegreeView[_Node]: ...  # type: ignore[override] # Returns DiDegreeView or int

stubs/networkx/networkx/classes/graph.pyi

@@ -6,7 +6,7 @@ from typing_extensions import Self, TypeAlias
 import numpy
 from networkx.classes.coreviews import AdjacencyView, AtlasView
 from networkx.classes.digraph import DiGraph
-from networkx.classes.reportviews import DegreeView, EdgeView, NodeView
+from networkx.classes.reportviews import DegreeView, DiDegreeView, EdgeView, NodeView, OutEdgeView
 
 _Node = TypeVar("_Node", bound=Hashable)
 _NodeWithData: TypeAlias = tuple[_Node, dict[str, Any]]
@@ -49,10 +49,10 @@ class Graph(Collection[_Node]):
     def name(self) -> str: ...
     @name.setter
     def name(self, s: str) -> None: ...
-    def __getitem__(self, n: _Node) -> AtlasView[_Node, str, Any]: ...
     def __iter__(self) -> Iterator[_Node]: ...
     def __contains__(self, n: object) -> bool: ...
     def __len__(self) -> int: ...
+    def __getitem__(self, n: _Node) -> AtlasView[_Node, str, Any]: ...
     def add_node(self, node_for_adding: _Node, **attr: Any) -> None: ...  # attr: Set or change node attributes using key=value
     def add_nodes_from(self, nodes_for_adding: Iterable[_NodePlus[_Node]], **attr: Any) -> None: ...  # attr: key=value pairs
     def remove_node(self, n: _Node) -> None: ...
@@ -62,7 +62,8 @@ class Graph(Collection[_Node]):
     def number_of_nodes(self) -> int: ...
     def order(self) -> int: ...
     def has_node(self, n: _Node) -> bool: ...
-    def add_edge(self, u_of_edge: _Node, v_of_edge: _Node, **attr: Any) -> None: ...
+    # Including subtypes' possible return types for LSP
+    def add_edge(self, u_of_edge: _Node, v_of_edge: _Node, **attr: Any) -> Hashable | None: ...
     # attr: Edge data (or labels or objects) can be assigned using keyword arguments
     def add_edges_from(self, ebunch_to_add: Iterable[_EdgePlus[_Node]], **attr: Any) -> None: ...
     # attr: Edge data (or labels or objects) can be assigned using keyword arguments
@@ -81,20 +82,22 @@ class Graph(Collection[_Node]):
     def has_edge(self, u: _Node, v: _Node) -> bool: ...
     def neighbors(self, n: _Node) -> Iterator[_Node]: ...
     @cached_property
-    def edges(self) -> EdgeView[_Node]: ...
+    # Including subtypes' possible return types for LSP
+    def edges(self) -> EdgeView[_Node] | OutEdgeView[_Node]: ...
     def get_edge_data(self, u: _Node, v: _Node, default: Any = None) -> dict[str, Any]: ...
     # default:  any Python object
     def adjacency(self) -> Iterator[tuple[_Node, dict[_Node, dict[str, Any]]]]: ...
     @cached_property
-    def degree(self) -> int | DegreeView[_Node]: ...
+    # Including subtypes' possible return types for LSP
+    def degree(self) -> DegreeView[_Node] | DiDegreeView[_Node]: ...
     def clear(self) -> None: ...
     def clear_edges(self) -> None: ...
     def is_multigraph(self) -> bool: ...
     def is_directed(self) -> bool: ...
     def copy(self, as_view: bool = False) -> Self: ...
     def to_directed(self, as_view: bool = False) -> DiGraph[_Node]: ...
     def to_undirected(self, as_view: bool = False) -> Graph[_Node]: ...
-    def subgraph(self, nodes: Iterable[_Node]) -> Graph[_Node]: ...
+    def subgraph(self, nodes: _NBunch[_Node]) -> Graph[_Node]: ...
     def edge_subgraph(self, edges: Iterable[_Edge[_Node]]) -> Graph[_Node]: ...
     @overload
     def size(self, weight: None = None) -> int: ...

stubs/networkx/networkx/classes/multidigraph.pyi

@@ -3,35 +3,36 @@ from typing import Any
 
 from networkx.classes.coreviews import MultiAdjacencyView
 from networkx.classes.digraph import DiGraph
-from networkx.classes.graph import _EdgeWithData, _Node
+from networkx.classes.graph import _Node
 from networkx.classes.multigraph import MultiGraph
 from networkx.classes.reportviews import (
+    DiMultiDegreeView,
     InMultiDegreeView,
-    InMultiEdgeDataView,
     InMultiEdgeView,
     OutMultiDegreeView,
     OutMultiEdgeView,
 )
 
 __all__ = ["MultiDiGraph"]
 
+# NOTE: Graph subclasses relationships are so complex
+# we're only overriding methods that differ in signature from the base classes
+# to use inheritance to our advantage and reduce complexity
 class MultiDiGraph(MultiGraph[_Node], DiGraph[_Node]):
     @cached_property
     def succ(self) -> MultiAdjacencyView[_Node, _Node, dict[str, Any]]: ...
     @cached_property
     def pred(self) -> MultiAdjacencyView[_Node, _Node, dict[str, Any]]: ...
     @cached_property
-    def edges(self) -> OutMultiEdgeView[_Node]: ...  # type: ignore[override]
-    # Returns: OutMultiEdgeView
+    def edges(self) -> OutMultiEdgeView[_Node]: ...
     @cached_property
     def out_edges(self) -> OutMultiEdgeView[_Node]: ...
     @cached_property
-    def in_edges(self) -> InMultiEdgeView[_Node] | InMultiEdgeDataView[_Node, _EdgeWithData[_Node]]: ...  # type: ignore[override]
-    # Returns : InMultiEdgeView or InMultiEdgeDataView
+    def in_edges(self) -> InMultiEdgeView[_Node]: ...
+    @cached_property
+    def degree(self) -> DiMultiDegreeView[_Node]: ...
     @cached_property
     def in_degree(self) -> InMultiDegreeView[_Node]: ...
     @cached_property
     def out_degree(self) -> OutMultiDegreeView[_Node]: ...
-    def to_undirected(self, reciprocal: bool = False, as_view: bool = False) -> MultiGraph[_Node]: ...  # type: ignore[override]
-    def reverse(self, copy: bool = True) -> MultiDiGraph[_Node]: ...
-    def copy(self, as_view: bool = False) -> MultiDiGraph[_Node]: ...
+    def to_undirected(self, reciprocal: bool = False, as_view: bool = False) -> MultiGraph[_Node]: ...  # type: ignore[override] # Has an additional `reciprocal` keyword argument

stubs/networkx/networkx/classes/multigraph.pyi

@@ -6,7 +6,7 @@ from typing_extensions import TypeAlias, TypeVar
 from networkx.classes.coreviews import MultiAdjacencyView
 from networkx.classes.graph import Graph, _MapFactory, _Node
 from networkx.classes.multidigraph import MultiDiGraph
-from networkx.classes.reportviews import MultiEdgeView
+from networkx.classes.reportviews import DiMultiDegreeView, MultiDegreeView, MultiEdgeView, OutMultiEdgeView
 
 _MultiEdge: TypeAlias = tuple[_Node, _Node, int]  # noqa: Y047
 
@@ -15,36 +15,43 @@ _KeyT = TypeVar("_KeyT", bound=Hashable)
 
 __all__ = ["MultiGraph"]
 
+# NOTE: Graph subclasses relationships are so complex
+# we're only overriding methods that differ in signature from the base classes
+# to use inheritance to our advantage and reduce complexity
 class MultiGraph(Graph[_Node]):
     edge_key_dict_factory: ClassVar[_MapFactory]
+    def to_directed_class(self) -> type[MultiDiGraph[_Node]]: ...
+    def to_undirected_class(self) -> type[MultiGraph[_Node]]: ...
     def __init__(self, incoming_graph_data=None, multigraph_input: bool | None = None, **attr: Any) -> None: ...
     @cached_property
     def adj(self) -> MultiAdjacencyView[_Node, _Node, dict[str, Any]]: ...  # data can be any type
     def new_edge_key(self, u: _Node, v: _Node) -> int: ...
-    @overload  # type: ignore[override]  # Has an additional `key` keyword argument
+    # key : hashable identifier, optional (default=lowest unused integer)
+    @overload  # type: ignore[override] # More complex overload
     def add_edge(self, u_for_edge: _Node, v_for_edge: _Node, key: int | None = None, **attr: Any) -> int: ...
     @overload
     def add_edge(self, u_for_edge: _Node, v_for_edge: _Node, key: _KeyT, **attr: Any) -> _KeyT: ...
-    # key : hashable identifier, optional (default=lowest unused integer)
     def remove_edge(self, u: _Node, v: _Node, key: Hashable | None = None) -> None: ...
     def has_edge(self, u: _Node, v: _Node, key: Hashable | None = None) -> bool: ...
+    @cached_property
+    # Including subtypes' possible return types for LSP
+    def edges(self) -> MultiEdgeView[_Node] | OutMultiEdgeView[_Node]: ...
+    # key : hashable identifier, optional (default=None).
+    # default : any Python object (default=None). Value to return if the specific edge (u, v, key) is not found.
+    # Returns: The edge attribute dictionary.
     @overload  # type: ignore[override]
     def get_edge_data(
         self, u: _Node, v: _Node, key: Hashable, default: _DefaultT | None = None
     ) -> dict[str, Any] | _DefaultT: ...
-    # key : hashable identifier, optional (default=None).
-    # default : any Python object (default=None). Value to return if the specific edge (u, v, key) is not found.
-    # Returns: The edge attribute dictionary.
+    # default : any Python object (default=None). Value to return if there are no edges between u and v and no key is specified.
+    # Returns: A dictionary mapping edge keys to attribute dictionaries for each of those edges if no specific key is provided.
     @overload
     def get_edge_data(
         self, u: _Node, v: _Node, key: None = None, default: _DefaultT | None = None
     ) -> dict[Hashable, dict[str, Any] | _DefaultT]: ...
-    # default : any Python object (default=None). Value to return if there are no edges between u and v and no key is specified.
-    # Returns: A dictionary mapping edge keys to attribute dictionaries for each of those edges if no specific key is provided.
     def copy(self, as_view: bool = False) -> MultiGraph[_Node]: ...
+    @cached_property
+    # Including subtypes' possible return types for LSP
+    def degree(self) -> MultiDegreeView[_Node] | DiMultiDegreeView[_Node]: ...
     def to_directed(self, as_view: bool = False) -> MultiDiGraph[_Node]: ...
     def to_undirected(self, as_view: bool = False) -> MultiGraph[_Node]: ...
-    def number_of_edges(self, u: _Node | None = None, v: _Node | None = None) -> int: ...
-    @cached_property
-    def edges(self) -> MultiEdgeView[_Node]: ...  # type: ignore[override]
-    # Returns: MultiEdgeView