|
7 | 7 |
|
8 | 8 | There were no ERRORs, WARNING or NOTEs |
9 | 9 |
|
10 | | -## revdepcheck results |
| 10 | +We checked 2338 reverse dependencies (1971 from CRAN + 367 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. |
11 | 11 |
|
12 | | -We checked 2152 reverse dependencies (1774 from CRAN + 378 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. |
| 12 | + * We saw 3 new problems |
| 13 | + * We failed to check 53 packages |
13 | 14 |
|
14 | | - * We saw 81 new problems |
15 | | - * We failed to check 32 packages |
16 | | - |
17 | | -This is an unfortuantely high number of failures. The ggplot2 development team carefully analysed all revdep failures to confirm that they were due to deliberate API changes - unfortunately many downstream packages relied on internal, undocumented, features of ggplot2 objects, which changed in this version. We advised authors about problems on May 21 and again on June 18. I'm happy to run the checks again from my end and re-advise if that would be helpful to you. |
| 15 | +Issues with CRAN packages are summarised below. |
18 | 16 |
|
19 | 17 | ### New problems |
20 | 18 | (This reports the first line of each new failure) |
21 | 19 |
|
22 | | -* bayesAB |
23 | | - checking tests ... |
24 | | - |
25 | | -* bayesplot |
26 | | - checking tests ... |
27 | | - |
28 | | -* benchmark |
29 | | - checking whether package ‘benchmark’ can be installed ... WARNING |
30 | | - |
31 | | -* benchr |
32 | | - checking tests ... |
33 | | - |
34 | | -* BioPET |
35 | | - checking examples ... ERROR |
36 | | - |
37 | | -* BrailleR |
38 | | - checking examples ... ERROR |
39 | | - checking tests ... |
40 | | - checking re-building of vignette outputs ... WARNING |
41 | | - |
42 | | -* cellWise |
43 | | - checking re-building of vignette outputs ... WARNING |
44 | | - |
45 | | -* choroplethr |
46 | | - checking examples ... ERROR |
47 | | - |
48 | | -* civis |
49 | | - checking tests ... |
50 | | - |
51 | | -* clustree |
52 | | - checking examples ... ERROR |
53 | | - checking re-building of vignette outputs ... WARNING |
54 | | - |
55 | | -* colorplaner |
56 | | - checking examples ... ERROR |
57 | | - checking tests ... |
58 | | - checking re-building of vignette outputs ... WARNING |
59 | | - |
60 | | -* cosinor2 |
61 | | - checking examples ... ERROR |
62 | | - |
63 | | -* countytimezones |
64 | | - checking re-building of vignette outputs ... WARNING |
65 | | - |
66 | | -* cowplot |
67 | | - checking tests ... |
68 | | - |
69 | | -* cricketr |
70 | | - checking whether package ‘cricketr’ can be installed ... WARNING |
71 | | - |
72 | | -* DendroSync |
73 | | - checking examples ... ERROR |
74 | | - |
75 | | -* dextergui |
76 | | - checking whether package ‘dextergui’ can be installed ... WARNING |
77 | | - |
78 | | -* dgo |
79 | | - checking tests ... |
80 | | - |
81 | | -* dMod |
82 | | - checking examples ... ERROR |
83 | | - checking re-building of vignette outputs ... WARNING |
84 | | - |
85 | | -* docxtools |
86 | | - checking tests ... |
87 | | - |
88 | | -* emojifont |
89 | | - checking re-building of vignette outputs ... WARNING |
90 | | - |
91 | | -* extracat |
92 | | - checking examples ... ERROR |
93 | | - |
94 | | -* fastR2 |
95 | | - checking examples ... ERROR |
96 | | - checking whether package ‘fastR2’ can be installed ... WARNING |
97 | | - |
98 | | -* fiftystater |
99 | | - checking re-building of vignette outputs ... WARNING |
100 | | - |
101 | | -* forecast |
102 | | - checking examples ... ERROR |
103 | | - |
104 | | -* ForecastComb |
105 | | - checking whether package ‘ForecastComb’ can be installed ... WARNING |
106 | | - |
107 | | -* foreSIGHT |
| 20 | +* FLightR |
108 | 21 | checking examples ... ERROR |
109 | | - checking re-building of vignette outputs ... WARNING |
110 | | - |
111 | | -* fpp2 |
112 | | - checking whether package ‘fpp2’ can be installed ... WARNING |
113 | | - |
114 | | -* GeomComb |
115 | | - checking whether package ‘GeomComb’ can be installed ... WARNING |
116 | | - |
117 | | -* ggdistribute |
118 | | - checking examples ... ERROR |
119 | | - |
120 | | -* ggedit |
121 | | - checking examples ... ERROR |
122 | | - |
123 | | -* ggFacetSample |
124 | | - checking examples ... ERROR |
125 | | - |
126 | | -* ggforce |
127 | | - checking for code/documentation mismatches ... WARNING |
| 22 | + Appears to unrelated - API key problem |
128 | 23 |
|
129 | | -* ggformula |
130 | | - checking examples ... ERROR |
131 | | - checking re-building of vignette outputs ... WARNING |
132 | | - |
133 | | -* gggenes |
134 | | - checking examples ... ERROR |
135 | | - checking tests ... |
136 | | - checking re-building of vignette outputs ... WARNING |
137 | | - |
138 | | -* gghighlight |
139 | | - checking examples ... ERROR |
140 | | - checking tests ... |
141 | | - |
142 | | -* ggiraphExtra |
143 | | - checking examples ... ERROR |
| 24 | +* lime |
144 | 25 | checking tests ... |
145 | | - checking re-building of vignette outputs ... WARNING |
| 26 | + Appears to unrelated - file download problem |
146 | 27 |
|
147 | | -* ggmap |
148 | | - checking examples ... ERROR |
149 | | - |
150 | | -* ggmosaic |
151 | | - checking examples ... ERROR |
152 | | - checking re-building of vignette outputs ... WARNING |
153 | | - checking Rd \usage sections ... NOTE |
154 | | - |
155 | | -* ggpol |
156 | | - checking examples ... ERROR |
157 | | - checking re-building of vignette outputs ... WARNING |
158 | | - |
159 | | -* ggpubr |
160 | | - checking examples ... ERROR |
161 | | - |
162 | | -* ggpval |
163 | | - checking examples ... ERROR |
164 | | - checking tests ... |
165 | | - checking re-building of vignette outputs ... WARNING |
166 | | - |
167 | | -* ggraph |
168 | | - checking examples ... ERROR |
169 | | - checking S3 generic/method consistency ... WARNING |
170 | | - checking re-building of vignette outputs ... WARNING |
171 | | - checking Rd \usage sections ... NOTE |
172 | | - |
173 | | -* ggstance |
174 | | - checking tests ... |
175 | | - |
176 | | -* healthcareai |
177 | | - checking tests ... |
178 | | - |
179 | | -* heatmaply |
180 | | - checking tests ... |
181 | | - |
182 | | -* heatwaveR |
183 | | - checking tests ... |
184 | | - |
185 | | -* hyperSpec |
186 | | - checking examples ... ERROR |
187 | | - |
188 | | -* imputeTestbench |
189 | | - checking whether package ‘imputeTestbench’ can be installed ... WARNING |
190 | | - |
191 | | -* INDperform |
192 | | - checking tests ... |
193 | | - |
194 | | -* jcolors |
195 | | - checking examples ... ERROR |
196 | | - |
197 | | -* jtools |
198 | | - checking tests ... |
199 | | - checking re-building of vignette outputs ... WARNING |
200 | | - |
201 | | -* lavaSearch2 |
202 | | - checking whether package ‘lavaSearch2’ can be installed ... WARNING |
203 | | - |
204 | | -* mafs |
205 | | - checking whether package ‘mafs’ can be installed ... WARNING |
206 | | - |
207 | | -* malariaAtlas |
208 | | - checking tests ... |
209 | | - |
210 | | -* mosaic |
211 | | - checking examples ... ERROR |
212 | | - |
213 | | -* mosaicModel |
214 | | - checking re-building of vignette outputs ... WARNING |
215 | | - |
216 | | -* oddsratio |
217 | | - checking examples ... ERROR |
218 | | - checking tests ... |
219 | | - checking re-building of vignette outputs ... WARNING |
220 | | - |
221 | | -* optiRum |
222 | | - checking tests ... |
223 | | - |
224 | | -* otvPlots |
225 | | - checking tests ... |
226 | | - |
227 | | -* phyloseqGraphTest |
228 | | - checking examples ... ERROR |
229 | | - checking re-building of vignette outputs ... WARNING |
230 | | - |
231 | | -* platetools |
232 | | - checking examples ... ERROR |
233 | | - |
234 | | -* plotly |
235 | | - checking tests ... |
236 | | - |
237 | | -* plotROC |
238 | | - checking re-building of vignette outputs ... WARNING |
239 | | - |
240 | | -* reghelper |
241 | | - checking tests ... |
242 | | - |
243 | | -* robustbase |
244 | | - checking running R code from vignettes ... |
245 | | - |
246 | | -* RStoolbox |
247 | | - checking examples ... ERROR |
248 | | - |
249 | | -* scatterpie |
250 | | - checking examples ... ERROR |
251 | | - checking re-building of vignette outputs ... WARNING |
252 | | - |
253 | | -* SimDesign |
254 | | - checking re-building of vignette outputs ... WARNING |
255 | | - |
256 | | -* sugrrants |
257 | | - checking examples ... ERROR |
258 | | - checking re-building of vignette outputs ... WARNING |
259 | | - |
260 | | -* svdvis |
261 | | - checking examples ... ERROR |
262 | | - checking re-building of vignette outputs ... WARNING |
263 | | - |
264 | | -* synthpop |
265 | | - checking examples ... ERROR |
266 | | - |
267 | | -* toaster |
268 | | - checking tests ... |
269 | | - |
270 | | -* trackr |
271 | | - checking examples ... ERROR |
272 | | - checking tests ... |
273 | | - |
274 | | -* ukgasapi |
275 | | - checking examples ... ERROR |
276 | | - |
277 | | -* vdmR |
278 | | - checking examples ... ERROR |
279 | | - |
280 | | -* voxel |
281 | | - checking examples ... ERROR |
282 | | - |
283 | | -* WRTDStidal |
284 | | - checking whether package ‘WRTDStidal’ can be installed ... WARNING |
285 | | - |
286 | | -* xkcd |
287 | | - checking examples ... ERROR |
288 | | - |
289 | | -* XLConnect |
290 | | - checking tests ... |
291 | | - |
292 | | -* xpose |
293 | | - checking examples ... ERROR |
| 28 | +* postal |
294 | 29 | checking tests ... |
295 | | - checking re-building of vignette outputs ... WARNING |
| 30 | + Appears to be unrelated - looks like file read problem |
296 | 31 |
|
297 | 32 | ### Failed to check |
298 | 33 |
|
| 34 | +* ALA4R (check timed out) |
| 35 | +* av (failed to install) |
299 | 36 | * BACCT (failed to install) |
300 | 37 | * bamdit (failed to install) |
301 | 38 | * BayesRS (failed to install) |
| 39 | +* BMSC (failed to install) |
302 | 40 | * BNSP (failed to install) |
303 | 41 | * bsam (failed to install) |
304 | 42 | * BTSPAS (failed to install) |
| 43 | +* choroplethr (failed to install) |
305 | 44 | * classify (failed to install) |
| 45 | +* CoordinateCleaner (failed to install) |
306 | 46 | * crmPack (failed to install) |
| 47 | +* DeLorean (failed to install) |
307 | 48 | * dynr (failed to install) |
308 | 49 | * ewoc (failed to install) |
| 50 | +* fdq (failed to install) |
| 51 | +* Fgmutils (failed to install) |
| 52 | +* fieldRS (failed to install) |
309 | 53 | * fingerPro (failed to install) |
310 | | -* glmmTMB (check timed out) |
| 54 | +* gastempt (failed to install) |
| 55 | +* GENEAsphere (failed to install) |
| 56 | +* geofacet (failed to install) |
| 57 | +* ggstatsplot (check timed out) |
| 58 | +* GmAMisc (failed to install) |
311 | 59 | * HTSSIP (check timed out) |
312 | | -* magick (failed to install) |
313 | | -* mglR (check timed out) |
| 60 | +* ITGM (failed to install) |
| 61 | +* jarbes (failed to install) |
| 62 | +* JointAI (failed to install) |
| 63 | +* MetaStan (failed to install) |
| 64 | +* milr (check timed out) |
314 | 65 | * morse (failed to install) |
315 | 66 | * mwaved (failed to install) |
| 67 | +* onemap (check timed out) |
316 | 68 | * pcaPA (failed to install) |
317 | 69 | * phase1RMD (failed to install) |
318 | 70 | * phylosim (check timed out) |
| 71 | +* pmc (check timed out) |
| 72 | +* ppcSpatial (failed to install) |
319 | 73 | * RcmdrPlugin.FuzzyClust (check timed out) |
320 | 74 | * rpanel (failed to install) |
| 75 | +* rstan (check timed out) |
321 | 76 | * rstanarm (check timed out) |
322 | 77 | * rsvg (failed to install) |
323 | 78 | * seewave (failed to install) |
324 | 79 | * SeqFeatR (failed to install) |
325 | 80 | * sf (failed to install) |
326 | | -* sgmcmc (check timed out) |
| 81 | +* simmr (failed to install) |
327 | 82 | * simulator (check timed out) |
328 | 83 | * TeachingDemos (check timed out) |
329 | | -* tricolore (failed to install) |
| 84 | +* trialr (failed to install) |
| 85 | +* walker (check timed out) |
330 | 86 | * zooaRchGUI (failed to install) |
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