Backus Lab at UCLA
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- Ensemble-Prediction-Pipeline-To-Identify-Neoantigens Public Forked from Jose-Paredes-Larios/Ensemble-Prediction-Pipeline-To-Identify-Neoantigens
BackusLab/Ensemble-Prediction-Pipeline-To-Identify-Neoantigens’s past year of commit activity - FPICS-Iodination-Quant Public Forked from NitheshPerumal/FPICS-Iodination-Quant
Quantify site specific iodination using PSM level data
BackusLab/FPICS-Iodination-Quant’s past year of commit activity - POCA_Becker Public
R code used for visualization of mass spectrometry samples where protein abundance is quantified with label free–match between runs and code for multiple linear regression & Spearman corrlation analyses.
BackusLab/POCA_Becker’s past year of commit activity - ms_cpdaa_analysis Public Forked from lmboat/ms_cpdaa_analysis
Mass spectrometry-based chemoproteomics pipeline for analyzing electrophile selectivity and identifying chemoproteomics detected amino acids (CpDAAs)
BackusLab/ms_cpdaa_analysis’s past year of commit activity - Custom-Variant-Database Public Forked from ndaw365/FASTA-Variant-Processing-
Tool to generate protein databases for custom variants
BackusLab/Custom-Variant-Database’s past year of commit activity - DepMAP-Database-Generation Public Forked from ndaw365/Protein-and-Peptide-Database-Generation
Tool to generate Protein and Peptide Databases from Variant Expression data in DepMAP
BackusLab/DepMAP-Database-Generation’s past year of commit activity - CysdbAutomerge-Django Public Forked from peiyuanlee/CysdbAutomerge
Protein Database AutoMerging for the Backus Lab
BackusLab/CysdbAutomerge-Django’s past year of commit activity - chemoproteogenomics Public Forked from hdesai17/chemoproteogenomics
Generate protoegenomic search databases form variant-calling output (VCF files) and run 2-stage or multi-round FragPipe searches.
BackusLab/chemoproteogenomics’s past year of commit activity - cysloc Public Forked from lmboat/cyslocdb
Integrating chemoproteomics, subcellular localization annotations and experimental oxidation measurements to define the subcellular cysteinome and redoxome.
BackusLab/cysloc’s past year of commit activity
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