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Extracting Marker Info ( SNPs used for calling contamination )

Status: Open.

#67 In Griffan/VerifyBamID;

· shubhambinf1987 opened on May 28, 2025

VerifyBamID: Ensuring Accurate .mu and .UD File Creation

enhancement

Status: Open.

#61 In Griffan/VerifyBamID;

· shadizaheri opened on Feb 21, 2024

Very high FREEMIX value with WES experiments

Status: Open.

#54 In Griffan/VerifyBamID;

· rulixxx opened on Jun 2, 2023

the bug about argument "--ignoreRG"

Status: Open.

#50 In Griffan/VerifyBamID;

· WortJohn opened on Apr 11, 2023

VB2 on RNA shortgun sequecing

Status: Open.

#47 In Griffan/VerifyBamID;

· manifestoso opened on Oct 11, 2022

VBID2 may be underestimating intra-family contamination when applied to long reads (CCS)

Status: Open.

#46 In Griffan/VerifyBamID;

· SHuang-Broad opened on Oct 3, 2022

Long read bam processing

Status: Open.

#43 In Griffan/VerifyBamID;

· SHuang-Broad opened on Sep 8, 2022

CHIPMIX NA value

Status: Open.

#36 In Griffan/VerifyBamID;

· iagooteroc opened on Feb 11, 2022

Can VerifyBamID identify the source of contamination?

Status: Open.

#33 In Griffan/VerifyBamID;

· ManavalanG opened on Dec 27, 2021

verifyBamID can't handle missing trailing fields of sample

enhancement

Status: Open.

#13 In Griffan/VerifyBamID;

· matmu opened on Feb 4, 2019