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added support to add absplice scores manually, add test cases #170

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Merged
merged 22 commits into from
Jun 16, 2025
Merged

added support to add absplice scores manually, add test cases #170

merged 22 commits into from
Jun 16, 2025

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@Marcel-Mueck
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*Testing tis done automatically using github actions

@Marcel-Mueck Marcel-Mueck mentioned this pull request Apr 28, 2025
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Marcel-Mueck and others added 14 commits April 28, 2025 17:10
@Marcel-Mueck
added section in the doc to explain how to add absplice scores manually
b55c973
@Marcel-Mueck
Merge branch 'add-prescored-absplice-support' of https://github.com/P…
22627e5 
…MBio/deeprvat into add-prescored-absplice-support
@Marcel-Mueck
added duckdb to environment
06fd871
@Marcel-Mueck
sorted values before testing equality in pytest as order may vary
e2c33e6
fixup! Format Python code with psf/black pull_request
ba69d2a
@Marcel-Mueck
formatted docstrings
1de2702
@Marcel-Mueck
Merge branch 'add-prescored-absplice-support' of https://github.com/P…
ca577f9 
…MBio/deeprvat into add-prescored-absplice-support
@Marcel-Mueck
sorted values by gene ids as well
a5404cb
fixup! Format Python code with psf/black pull_request
f287221
@Marcel-Mueck
removed unneccessray/commented out sections
5aeade0
fixup! Format Python code with psf/black pull_request
6080487
@Marcel-Mueck
removed unnecessary/commented out sections
b539528
@Marcel-Mueck
made test data smaller for faster run
7b0673f
@Marcel-Mueck
Merge branch 'add-prescored-absplice-support' of https://github.com/P…
9247e46 
…MBio/deeprvat into add-prescored-absplice-support
@bfclarke bfclarke merged commit 2144202 into main Jun 16, 2025
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@bfclarke bfclarke bfclarke approved these changes

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@bfclarke bfclarke

@meyerkm meyerkm

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@Marcel-Mueck @bfclarke @meyerkm