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@dependabot dependabot bot commented on behalf of github Sep 15, 2025

Reproduces nipreps/fmriprep#3512, nipreps/fmriprep#3491, and nipreps/fmriprep#3513.

Updates the requirements on smriprep to permit the latest version.

Changelog

Sourced from smriprep's changelog.

0.19.1 (September 12, 2025)

Bug-fix release in the 0.19.x series.

Fixed a package metadata error.

0.19.0 (September 12, 2025)

New feature release in the 0.19.x series.

This release enables per-session processing and more flexible surfacet resampling.

  • FIX: Collate pre-computed transforms correctly (#487)
  • ENH: Resample surfaces to any space/density using Connectome Workbench. (#473)
  • ENH: Generate cortex mask in during fit stage (#482)
  • ENH: Use output surfaces in internal nodes, ensuring greater consistency (#483)
  • ENH: Enable per-session processing (#480)
  • DOC: Fix typo in citation boilerplate (sMRIPprep → sMRIPrep) (#489)
  • STY: ISC rules do not conflict with the formatter any more (#484)

0.18.0 (May 08, 2025)

New feature release in the 0.18.x series.

This release patches the FSL FAST interface to disable bias field correction, which is redundant with N4 and can cause problems in some populations.

  • FIX: Respect label order in precomputed derivatives (#478)
  • FIX: Set FAST bias_iters parameter to 0 (#472)
  • ENH: Tag structural workflows (#476)
  • MNT: Update pinned environment, use conda-forge connectome-workbench (#468)

0.17.0 (December 19, 2024)

New feature release in the 0.17.x series.

This release improves handling of datasets where T1w images are not the primary modality. It also supports the generation of fsLR meshes on the subject surface with the names:

sub-<label>/anat/sub-<label>_hemi-<L|R>_space-fsLR_den-<label>_<surface>.surf.gii

These are useful for plotting CIFTI results on subject anatomy.

  • FIX: Stop excluding FS minc_modify_header used during fallback registration (#453)
  • ENH: Output fsLR meshes on subject surfaces (#460)
  • ENH: Support spatial normalization to alternative modalities (#459)
  • ENH: Add t2w_file output to TemplateFlowSelect (#457)

... (truncated)

Commits
  • 5fa7032 rel: 0.19.1
  • 23612a6 fix: Update dependencies
  • c1b95b6 rel: 0.19.0
  • afde296 Merge pull request #489 from Ramlah7/fix-typo-smriprep
  • 64498ad Fix typo: sMRIPprep → sMRIPrep in citation boilerplate
  • 52a3757 chore(deps): Require templateflow 25.0+
  • 29e2932 Merge pull request #473 from feilong/master
  • 82f1bc5 Merge pull request #485 from effigies/ci/pytest-xdist
  • 8d03291 Merge pull request #487 from tsalo/fix-in-place-queries
  • 126d5c6 Update test_bids.py
  • Additional commits viewable in compare view

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Updates the requirements on [smriprep](https://github.com/nipreps/smriprep) to permit the latest version.
- [Release notes](https://github.com/nipreps/smriprep/releases)
- [Changelog](https://github.com/nipreps/smriprep/blob/0.19.1/CHANGES.rst)
- [Commits](nipreps/smriprep@0.18.0...0.19.1)

---
updated-dependencies:
- dependency-name: smriprep
  dependency-version: 0.19.1
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added ignore-for-release PRs that shouldn't be included with release notes. maintenance Issues/PRs related to maintenance. Dependency versions, dependencies, etc. labels Sep 15, 2025
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@tsalo tsalo force-pushed the dependabot/pip/smriprep-approx-eq-0.19.1 branch from 45b908b to cfffadf Compare September 16, 2025 16:27
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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 76.48%. Comparing base (989082a) to head (ad7a7cc).

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #588      +/-   ##
==========================================
+ Coverage   76.41%   76.48%   +0.06%     
==========================================
  Files          38       38              
  Lines        4435     4448      +13     
==========================================
+ Hits         3389     3402      +13     
  Misses       1046     1046              

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@tsalo tsalo changed the title Update smriprep requirement from ~=0.18.0 to ~=0.19.1 Update smriprep requirement from ~=0.18.0 to ~=0.19.1 and reproduce fMRIPrep PRs Sep 16, 2025
@tsalo tsalo added nipreps Maintains consistency with the rest of the nipreps ecosystem (especially fMRIPrep). and removed ignore-for-release PRs that shouldn't be included with release notes. labels Sep 16, 2025
@tsalo tsalo merged commit d5caa3e into main Sep 16, 2025
27 checks passed
@tsalo tsalo deleted the dependabot/pip/smriprep-approx-eq-0.19.1 branch September 16, 2025 18:27
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