alternative software for read error correction? #1563
Description
Description of bug
Since BayesHammer is not working for some inputs and it seems that it won't be fixed in the near future, I am planning to do read error correction prior to SPAdes, then run SPAdes with the assembler-only mode. Do you have any suggestions for alternative read error correction softwares? Thank you!
My reads are 150bp Illumina short reads for a metagenome data. Thank you!
spades.log
NA
params.txt
NA
SPAdes version
NA
Operating System
NA
Python Version
NA
Method of SPAdes installation
NA
No errors reported in spades.log
- Yes