Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Jul 14 01:06:48 2025	Mon Jul 07 01:03:43 2025
1	Toolset	Mon Jul 14 13:04:41 2025	Mon Jul 07 13:00:32 2025
2	Toolset	Tue Jul 15 01:02:35 2025	Tue Jul 08 00:59:03 2025
3	Toolset	Tue Jul 08 13:03:40 2025	Tue Jul 01 13:00:54 2025
4	Toolset	Wed Jul 09 01:02:22 2025	Wed Jul 02 00:59:46 2025
5	Toolset	Wed Jul 09 13:01:10 2025	Wed Jul 02 12:59:42 2025
6	Toolset	Thu Jul 03 00:59:22 2025	Thu Jun 26 00:59:12 2025
7	Toolset	Thu Jul 10 13:02:22 2025	Thu Jul 03 12:58:17 2025
8	Toolset	Fri Jul 11 01:00:15 2025	Fri Jul 04 00:59:06 2025
9	Toolset	Fri Jul 11 13:00:33 2025	Fri Jul 04 12:59:23 2025
10	Toolset	Sat Jul 12 01:00:45 2025	Sat Jul 05 00:57:37 2025
11	Toolset	Sat Jul 12 13:03:29 2025	Sat Jul 05 12:56:17 2025
12	Toolset	Sun Jul 13 01:07:39 2025	Sun Jul 06 01:05:52 2025
13	Toolset	Sun Jul 13 12:57:48 2025	Sun Jul 06 12:56:40 2025