feat: upgrade dependencies in pyproject.toml #13934

reneleonhardt · 2025-06-09T20:35:56Z

Summary

Provide uv upgrade to upgrade dependency constraints in pyproject.toml without changing/syncing uv.lock.

Closes #6794

Test Plan

Lots of manual testing 😅
Unit tests

Features

--dry-run to check the diff manually before overwriting pyproject.toml
Searches like the original find_dependency() method:
- [project.dependencies] (prod)
- [project.optional-dependencies] (optional)
- [dependency-groups] (groups)
- [tool.uv.dev-dependencies] (dev)
--types=prod,dev,optional,groups searches given sections only
--allow=1,2,3,4 filters version digits (1=major, 2=minor, 3=patch, 4=build number)
Supports the new tool.uv.dependency-groups requires-python per group
1. user-override (--python=>=3.12)
2. group ([tool.uv.dependency-groups])
3. toml ([project.requires-python])
Common operators are covered
Downgrades if needed (current constraint doesn't include latest, i.e. >1000)
--recursive searches skip hidden directories
Fetches latest versions in parallel
Caches latest versions for 10 minutes to speed up subsequents runs
- --refresh (cold cache) in this repo: Upgraded 199/860 dependencies in 37 files in 2 seconds
- --no-refresh (hot cache) in this repo: Upgraded 199/860 dependencies in 37 files in 1 second
- --no-cache (no cache) in this repo: Upgraded 199/860 dependencies in 37 files in 7 seconds
Uses as much uv internals / code as possible
Stays true to the original formatting except inside the constraints itself
- ollama<0.5, >=0.4 becomes ollama>=0.4,<0.6 (uv sorts versions and removes inner space)
- ; python_version >= \"3.11\" becomes ; python_full_version >= '3.11' (internal code)

Added for demonstration purposes:

[tool.uv.dependency-groups]
dev = {requires-python = ">3.10"}

zanieb · 2025-06-09T21:25:18Z

Thanks for the pull request!

We're still in the process of designing this feature and are consequently very unlikely to accept this pull request as-is — but hopefully it can be informative for our design and implementation!

cc @konstin

konstin · 2025-06-10T09:50:41Z

One major thing we need to handle in our design is when the latest version of two packages is incompatible, so we can't upgrade both or either to the latest version, another is to handle markers such as python_version which influence resolution, and dependency group requires-python (#13735). We also need to design the configuration for how version ranges are updated.

reneleonhardt · 2025-06-10T15:07:42Z

Example run in astral-sh/uv:

uv upgrade --recursive

diff --git a/ecosystem/github-wikidata-bot/pyproject.toml b/ecosystem/github-wikidata-bot/pyproject.toml
index eb430f513..7fceea56d 100644
--- a/ecosystem/github-wikidata-bot/pyproject.toml
+++ b/ecosystem/github-wikidata-bot/pyproject.toml
@@ -12,17 +12,17 @@ dependencies = [
     "CacheControl[filecache]>=0.14,<0.15",
     "mwparserfromhell >=0.6.4,<0.7",
     "pydantic >=2.7.1",
-    "pywikibot >=9.1.2,<10",
+    "pywikibot>=9.1.2,<11",
     "sentry-sdk >=2.0.1,<3",
     "yarl >=1.9,<2",
 ]
 
 [tool.uv]
 dev-dependencies = [
-    "httpx >=0.27.0,<0.28",
+    "httpx>=0.27.0,<0.29",
     "pytest >=8.0.0,<9",
-    "ruff >=0.5.0,<0.6",
-    "tqdm >=4.66.4,<4.67",
+    "ruff>=0.5.0,<0.12",
+    "tqdm>=4.66.4,<4.68",
     "types-requests >=2.31.0.20240406,<3",
 ]
 
diff --git a/ecosystem/home-assistant-core/pyproject.toml b/ecosystem/home-assistant-core/pyproject.toml
index 971f321d3..2e149da1a 100644
--- a/ecosystem/home-assistant-core/pyproject.toml
+++ b/ecosystem/home-assistant-core/pyproject.toml
@@ -23,53 +23,53 @@ classifiers = [
 ]
 requires-python = ">=3.12.0"
 dependencies    = [
-    "aiodns==3.2.0",
-    "aiohttp==3.9.5",
-    "aiohttp_cors==0.7.0",
-    "aiohttp-fast-url-dispatcher==0.3.0",
-    "aiohttp-fast-zlib==0.1.0",
-    "aiozoneinfo==0.2.0",
-    "astral==2.2",
-    "async-interrupt==1.1.1",
-    "attrs==23.2.0",
+    "aiodns==3.4.0",
+    "aiohttp==3.12.12",
+    "aiohttp-cors==0.8.1",
+    "aiohttp-fast-url-dispatcher==0.3.1",
+    "aiohttp-fast-zlib==0.3.0",
+    "aiozoneinfo==0.2.3",
+    "astral==3.2",
+    "async-interrupt==1.2.2",
+    "attrs==25.3.0",
     "atomicwrites-homeassistant==1.4.1",
-    "awesomeversion==24.2.0",
-    "bcrypt==4.1.2",
+    "awesomeversion==25.5.0",
+    "bcrypt==4.3.0",
     "certifi>=2021.5.30",
-    "ciso8601==2.3.1",
-    "fnv-hash-fast==0.5.0",
+    "ciso8601==2.3.2",
+    "fnv-hash-fast==1.5.0",
     # hass-nabucasa is imported by helpers which don't depend on the cloud
     # integration
-    "hass-nabucasa==0.81.1",
+    "hass-nabucasa==0.88.1",
     # When bumping httpx, please check the version pins of
     # httpcore, anyio, and h11 in gen_requirements_all
-    "httpx==0.27.0",
-    "home-assistant-bluetooth==1.12.1",
+    "httpx==0.28.1",
+    "home-assistant-bluetooth==1.13.1",
     "ifaddr==0.2.0",
-    "Jinja2==3.1.4",
+    "jinja2==3.1.6",
     "lru-dict==1.3.0",
-    "PyJWT==2.8.0",
+    "pyjwt==2.10.1",
     # PyJWT has loose dependency. We want the latest one.
-    "cryptography==42.0.8",
-    "Pillow==10.3.0",
-    "pyOpenSSL==24.1.0",
-    "orjson==3.9.15",
+    "cryptography==45.0.4",
+    "pillow==11.2.1",
+    "pyopenssl==25.1.0",
+    "orjson==3.10.18",
     "packaging>=23.1",
     "pip>=21.3.1",
     "psutil-home-assistant==0.0.1",
     "python-slugify==8.0.4",
-    "PyYAML==6.0.1",
-    "requests==2.32.3",
-    "SQLAlchemy==2.0.31",
+    "pyyaml==6.0.2",
+    "requests==2.32.4",
+    "sqlalchemy==2.0.41",
     "typing-extensions>=4.12.2,<5.0",
-    "ulid-transform==0.9.0",
+    "ulid-transform==1.4.0",
     # Constrain urllib3 to ensure we deal with CVE-2020-26137 and CVE-2021-33503
     # Temporary setting an upper bound, to prevent compat issues with urllib3>=2
     # https://github.com/home-assistant/core/issues/97248
-    "urllib3>=1.26.5,<2",
-    "voluptuous==0.13.1",
+    "urllib3>=1.26.5,<3",
+    "voluptuous==0.15.2",
     "voluptuous-serialize==2.6.0",
-    "yarl==1.9.4",
+    "yarl==1.20.1",
 ]
 
 [project.urls]
diff --git a/ecosystem/saleor/pyproject.toml b/ecosystem/saleor/pyproject.toml
index 307c54e29..013dbeb35 100644
--- a/ecosystem/saleor/pyproject.toml
+++ b/ecosystem/saleor/pyproject.toml
@@ -13,62 +13,62 @@ requires-python = ">=3.12"
 dependencies = [
   "chevron-blue>=0.2.1,<0.3.0",
   "hatchling>=1.20.0,<2.0.0",
-  "msgspec>=0.18.4,<0.19.0",
+  "msgspec>=0.18.4,<0.20.0",
   "pypiserver>=2.0.1,<3.0.0",
   "pyyaml>=6.0.1,<7.0.0",
-  "setuptools>=71.1.0,<72.0.0",
-  "twine>=4.0.2,<5.0.0",
-  "watchfiles>=0.21.0,<0.22.0",
-  "adyen>=4.0.0,<5.0.0",
+  "setuptools>=71.1.0,<80.10.0",
+  "twine>=4.0.2,<6.2.0",
+  "watchfiles>=0.21.0,<1.1.0",
+  "adyen>=4.0.0,<13.5.0",
   "authlib>=1.3.1,<2.0.0",
-  "rx>=1.6.3,<2.0.0",
-  "aniso8601>=7.0.0,<8.0.0",
+  "rx>=1.6.3,<3.3.0",
+  "aniso8601>=7.0.0,<10.1.0",
   "asgiref>=3.7.2,<4.0.0",
   "azure-common>=1.1.28,<2.0.0",
   "azure-storage-blob>=12.12.0,<13.0.0",
   "azure-storage-common>=2.1.0,<3.0.0",
-  "babel>=2.8,<2.15",
+  "babel>=2.8,<2.18",
   "boto3>=1.28,<2.0",
   "botocore>=1.34,<2.0",
-  "braintree>=4.2,<4.30",
+  "braintree>=4.2,<4.37",
   "celery[redis]>=4.4.5,<6.0.0",
-  "cryptography>=42.0.5,<43.0.0",
-  "dj-database-url>=2,<3",
+  "cryptography>=42.0.5,<45.1.0",
+  "dj-database-url>=2,<4",
   "dj-email-url>=1,<2",
   "django-cache-url>=3.1.2,<4.0.0",
   "django-celery-beat>=2.2.1,<3.0.0",
   "django-countries>=7.2,<8.0",
-  "django-filter>=23.1,<24.0",
+  "django-filter>=23.1,<25.2",
   "django-measurement>=3.0,<4.0",
   "django-mptt>=0,<1",
-  "django-phonenumber-field>=4,<8",
+  "django-phonenumber-field>=4,<9",
   "django-prices>=2.3,<3.0",
   "django-storages[google]>=1.11,<2.0",
-  "django-stubs-ext>=4.2.1,<5.0.0",
-  "django[bcrypt]>=4.2,<5.0",
+  "django-stubs-ext>=4.2.1,<5.3.0",
+  "django[bcrypt]>=4.2,<5.3",
   "draftjs-sanitizer>=1.0.0,<2.0.0",
-  "faker>=26.0.0,<27.0",
+  "faker>=26.0.0,<37.4",
   "google-cloud-pubsub>=1.7,<3.0",
-  "google-cloud-storage>=2.0.0,<3.0.0",
+  "google-cloud-storage>=2.0.0,<3.2.0",
   "google-i18n-address>=3.1.0,<4.0.0",
-  "graphene<3.0",
-  "graphql-core>=2.3.2,<3.0.0",
-  "graphql-relay>=2.0.1,<3.0.0",
-  "gunicorn>=22.0.0,<23.0.0",
+  "graphene<3.5",
+  "graphql-core>=2.3.2,<3.3.0",
+  "graphql-relay>=2.0.1,<3.3.0",
+  "gunicorn>=22.0.0,<23.1.0",
   "html-to-draftjs>=1.0.1,<2.0.0",
-  "html2text>=2024.2.26,<2025.0.0",
+  "html2text>=2024.2.26,<2025.5.0",
   "jaeger-client>=4.5.0,<5.0.0",
-  "lxml>=4.9.3,<5.0.0",
+  "lxml>=4.9.3,<5.5.0",
   "markdown>=3.1.1,<4.0.0",
   "measurement>=3.2.2,<4.0.0",
   "micawber>=0.5.5,<0.6.0",
   "oauthlib>=3.1,<4.0",
   "opentracing>=2.3.0,<3.0.0",
-  "petl==1.7.15",
-  "phonenumberslite>=8.12.25,<9.0.0",
-  "pillow>=10.3.0,<11.0.0",
+  "petl==1.7.16",
+  "phonenumberslite>=8.12.25,<9.1.0",
+  "pillow>=10.3.0,<11.3.0",
   "pillow-avif-plugin>=1.3.1,<2.0.0",
-  "posuto>=2024.7.0,<2025.0.0",
+  "posuto>=2024.7.0,<2025.7.0",
   "prices>=1.0,<2.0",
   "promise>=2.3,<3.0",
   "psycopg[binary]>=3.1.8,<4.0.0",
@@ -76,22 +76,22 @@ dependencies = [
   "pyjwt>=2.9.0,<3.0.0",
   "python-dateutil>=2.8.2,<3.0.0",
   "python-http-client>=3.3.7,<4.0.0",
-  "python-json-logger>=0.1.11,<2.1.0",
+  "python-json-logger>=0.1.11,<3.4.0",
   "python-magic>=0.4.27,<0.5.0 ; sys_platform != 'win32'",
   "python-magic-bin>=0.4.14,<0.5.0 ; sys_platform == 'win32'",
   "pytimeparse>=1.1.8,<2.0.0",
-  "pytz>=2024.1,<2025.0",
+  "pytz>=2024.1,<2025.3",
   "razorpay>=1.2,<2.0",
-  "redis>=5.0.1,<6.0.0",
+  "redis>=5.0.1,<6.3.0",
   "requests>=2.32,<3.0",
-  "requests-hardened==1.0.0b3",
+  "requests-hardened==1.0.0",
   "semantic-version>=2.10.0,<3.0.0",
   "sendgrid>=6.7.1,<7.0.0",
   "sentry-sdk>=2.12,<3.0",
-  "stripe>=3.0.0,<4.0.0",
+  "stripe>=3.0.0,<12.3.0",
   "text-unidecode>=1.2,<2.0",
-  "urllib3>=1.26.19,<2.0.0",
-  "uvicorn[standard]>=0.23.1,<0.24.0",
+  "urllib3>=1.26.19,<2.5.0",
+  "uvicorn[standard]>=0.23.1,<0.35.0",
 ]
 
 [tool.deptry]
diff --git a/ecosystem/transformers/pyproject.toml b/ecosystem/transformers/pyproject.toml
index f3139b46b..52b9a5166 100644
--- a/ecosystem/transformers/pyproject.toml
+++ b/ecosystem/transformers/pyproject.toml
@@ -28,7 +28,7 @@ dependencies = [
     "pyyaml>=5.1",
     "regex!=2019.12.17",
     "requests",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "safetensors>=0.4.1",
     "tqdm>=4.27",
 ]
@@ -44,33 +44,33 @@ ja = [
     "unidic>=1.0.2",
     "sudachipy>=0.6.6",
     "sudachidict_core>=20220729",
-    "rhoknp>=1.1.0,<1.3.1"
+    "rhoknp>=1.1.0,<1.8.0"
 ]
 sklearn = ["scikit-learn"]
 tf = [
-    "tensorflow>=2.6,<2.16",
+    "tensorflow>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1"
 ]
 tf-cpu = [
-    "tensorflow-cpu>=2.6,<2.16",
+    "tensorflow-cpu>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1"
 ]
 torch = ["torch", "accelerate>=0.21.0"]
 accelerate = ["accelerate>=0.21.0"]
 retrieval = ["faiss-cpu", "datasets!=2.5.0"]
 flax = [
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
-    "flax>=0.4.1,<=0.7.0",
-    "optax>=0.0.8,<=0.1.4"
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
+    "flax>=0.4.1,<=0.9.0",
+    "optax>=0.0.8,<=0.2.4"
 ]
-tokenizers = ["tokenizers>=0.14,<0.19"]
+tokenizers = ["tokenizers>=0.14,<0.22"]
 ftfy = ["ftfy"]
 onnxruntime = ["onnxruntime>=1.4.0", "onnxruntime-tools>=1.4.2"]
 onnx = [
@@ -79,8 +79,8 @@ onnx = [
     "onnxruntime>=1.4.0",
     "onnxruntime-tools>=1.4.2"
 ]
-modelcreation = ["cookiecutter==1.7.3"]
-sagemaker = ["sagemaker==2.226.1"] # sagemaker>=2.31.0 # TODO(konsti)
+modelcreation = ["cookiecutter==2.6.0"]
+sagemaker = ["sagemaker==2.246.0"] # sagemaker>=2.31.0 # TODO(konsti)
 deepspeed = ["deepspeed>=0.9.3", "accelerate>=0.21.0"]
 optuna = ["optuna"]
 ray = ["ray[tune]>=2.7.0"]
@@ -108,27 +108,27 @@ vision = ["Pillow>=10.0.1,<=15.0"]
 timm = ["timm"]
 torch-vision = ["torchvision", "Pillow>=10.0.1,<=15.0"]
 # natten = ["natten>=0.14.6,<0.15.0"] # TODO(konsti)
-codecarbon = ["codecarbon==1.2.0"]
+codecarbon = ["codecarbon==3.0.2"]
 video = ["decord==0.6.0", "av"]
 sentencepiece = ["sentencepiece>=0.1.91,!=0.1.92", "protobuf"]
 
 deepspeed-testing = [
     "deepspeed>=0.9.3",
     "accelerate>=0.21.0",
-    "pytest>=7.2.0,<8.0.0",
+    "pytest>=7.2.0,<8.5.0",
     "pytest-xdist",
     "timeout-decorator",
     "parameterized",
     "psutil",
     "datasets!=2.5.0",
-    "dill<0.3.5",
+    "dill<0.5.0",
     "evaluate>=0.2.0",
     "pytest-timeout",
-    "ruff==0.1.5",
-    "sacrebleu>=1.4.12,<2.0.0",
+    "ruff==0.11.13",
+    "sacrebleu>=1.4.12,<2.6.0",
     "rouge-score!=0.0.7,!=0.0.8,!=0.1,!=0.1.1",
     "nltk",
-    "GitPython<3.1.19",
+    "gitpython<3.2.0",
     "hf-doc-builder>=0.3.0",
     "protobuf",
     "sacremoses",
@@ -138,7 +138,7 @@ deepspeed-testing = [
     "pydantic",
     "faiss-cpu",
     "datasets!=2.5.0",
-    "cookiecutter==1.7.3",
+    "cookiecutter==2.6.0",
     "optuna",
     "sentencepiece>=0.1.91,!=0.1.92",
     "protobuf"
@@ -146,26 +146,26 @@ deepspeed-testing = [
 quality = [
     "datasets!=2.5.0",
     "isort>=5.5.4",
-    "ruff==0.1.5",
-    "GitPython<3.1.19",
+    "ruff==0.11.13",
+    "gitpython<3.2.0",
     "hf-doc-builder>=0.3.0",
-    "urllib3<2.0.0"
+    "urllib3<2.5.0"
 ]
 all = [
-    "tensorflow>=2.6,<2.16",
+    "tensorflow>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1",
     "torch",
     "accelerate>=0.21.0",
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
-    "flax>=0.4.1,<=0.7.0",
-    "optax>=0.0.8,<=0.1.4",
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
+    "flax>=0.4.1,<=0.9.0",
+    "optax>=0.0.8,<=0.2.4",
     "sentencepiece>=0.1.91,!=0.1.92",
     "protobuf",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "torchaudio",
     "librosa",
     "pyctcdecode>=0.4.0",
@@ -178,27 +178,27 @@ all = [
     "timm",
     "torchvision",
     "Pillow>=10.0.1,<=15.0",
-    "codecarbon==1.2.0",
+    "codecarbon==3.0.2",
     "accelerate>=0.21.0",
     "decord==0.6.0",
     "av"
 ]
 docs_specific = ["hf-doc-builder"]
 docs = [
-    "tensorflow>=2.6,<2.16",
+    "tensorflow>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1",
     "torch",
     "accelerate>=0.21.0",
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
-    "flax>=0.4.1,<=0.7.0",
-    "optax>=0.0.8,<=0.1.4",
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
+    "flax>=0.4.1,<=0.9.0",
+    "optax>=0.0.8,<=0.2.4",
     "sentencepiece>=0.1.91,!=0.1.92",
     "protobuf",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "torchaudio",
     "librosa",
     "pyctcdecode>=0.4.0",
@@ -211,7 +211,7 @@ docs = [
     "timm",
     "torchvision",
     "Pillow>=10.0.1,<=15.0",
-    "codecarbon==1.2.0",
+    "codecarbon==3.0.2",
     "accelerate>=0.21.0",
     "decord==0.6.0",
     "av",
@@ -228,7 +228,7 @@ torchhub = [
     "requests",
     "sentencepiece>=0.1.91,!=0.1.92",
     "torch",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "tqdm>=4.27"
 ]
 agents = [
@@ -243,27 +243,27 @@ agents = [
 
 [dependency-groups]
 dev = [
-    "GitPython<3.1.19",
+    "gitpython<3.2.0",
     "Pillow>=10.0.1,<=15.0",
     "accelerate>=0.21.0",
     "av",
     "beautifulsoup4",
-    "codecarbon==1.2.0",
-    "codecarbon==1.2.0",
-    "cookiecutter==1.7.3",
+    "codecarbon==3.0.2",
+    "codecarbon==3.0.2",
+    "cookiecutter==2.6.0",
     "datasets!=2.5.0",
     "decord==0.6.0",
-    "dill<0.3.5",
+    "dill<0.5.0",
     "evaluate>=0.2.0",
     "faiss-cpu",
-    "flax>=0.4.1,<=0.7.0",
+    "flax>=0.4.1,<=0.9.0",
     "fugashi>=1.0",
     "hf-doc-builder",
     "hf-doc-builder>=0.3.0",
     "ipadic>=1.0.0,<2.0",
     "isort>=5.5.4",
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
     "kenlm",
     "keras-nlp>=0.3.1",
     "librosa",
@@ -271,7 +271,7 @@ dev = [
     "onnxconverter-common",
     "onnxruntime-tools>=1.4.2",
     "onnxruntime>=1.4.0",
-    "optax>=0.0.8,<=0.1.4",
+    "optax>=0.0.8,<=0.2.4",
     "optuna",
     "parameterized",
     "phonemizer",
@@ -281,13 +281,13 @@ dev = [
     "pydantic",
     "pytest-timeout",
     "pytest-xdist",
-    "pytest>=7.2.0,<8.0.0",
+    "pytest>=7.2.0,<8.5.0",
     "ray[tune]>=2.7.0",
-    "rhoknp>=1.1.0,<1.3.1",
+    "rhoknp>=1.1.0,<1.8.0",
     "rjieba",
     "rouge-score!=0.0.7,!=0.0.8,!=0.1,!=0.1.1",
-    "ruff==0.1.5",
-    "sacrebleu>=1.4.12,<2.0.0",
+    "ruff==0.11.13",
+    "sacrebleu>=1.4.12,<2.6.0",
     "sacremoses",
     "scikit-learn",
     "sentencepiece>=0.1.91,!=0.1.92",
@@ -295,18 +295,18 @@ dev = [
     "sudachidict_core>=20220729",
     "sudachipy>=0.6.6",
     "tensorboard",
-    "tensorflow-text<2.16",
-    "tensorflow>=2.6,<2.16",
+    "tensorflow-text<2.20",
+    "tensorflow>=2.6,<2.20",
     "tf2onnx",
     "timeout-decorator",
     "timm",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "torch",
     "torchaudio",
     "torchvision",
     "unidic>=1.0.2",
     "unidic_lite>=1.0.7",
-    "urllib3<2.0.0"
+    "urllib3<2.5.0"
 ]
 
 [build-system]
diff --git a/ecosystem/warehouse/pyproject.toml b/ecosystem/warehouse/pyproject.toml
index 62c4e3c7f..67e3abfc0 100644
--- a/ecosystem/warehouse/pyproject.toml
+++ b/ecosystem/warehouse/pyproject.toml
@@ -11,15 +11,15 @@ dependencies = [
   "Babel",
   "bcrypt",
   "boto3",
-  "celery[sqs]>=5.2.2,<5.3.2",
+  "celery[sqs]>=5.2.2,<5.6.0",
   "celery-redbeat",
   "certifi",
   "click",
   "cryptography",
   "datadog>=0.19.0",
   "disposable-email-domains",
-  "elasticsearch>=7.0.0,<7.11.0",
-  "elasticsearch_dsl>=7.0.0,<8.0.0",
+  "elasticsearch>=7.0.0,<9.1.0",
+  "elasticsearch-dsl>=7.0.0,<8.19.0",
   "first",
   "forcediphttpsadapter",
   "github-reserved-names>=1.0.0",
@@ -30,7 +30,7 @@ dependencies = [
   "humanize",
   "itsdangerous",
   "Jinja2>=2.8",
-  "kombu[sqs]<5.3.2", # https://github.com/jazzband/pip-tools/issues/1577
+  "kombu[sqs]<5.6.0", # https://github.com/jazzband/pip-tools/issues/1577
   "limits",
   "linehaul",
   "lxml",
@@ -63,7 +63,7 @@ dependencies = [
   "readme-renderer[md]>=36.0",
   "requests",
   "requests-aws4auth",
-  "redis>=2.8.0,<6.0.0",
+  "redis>=2.8.0,<6.3.0",
   "rfc3986",
   "sentry-sdk",
   "setuptools",
@@ -74,7 +74,7 @@ dependencies = [
   "transaction",
   "trove-classifiers",
   "ua-parser",
-  "urllib3<2", # See https://github.com/pypi/warehouse/issues/14671,
+  "urllib3<3", # See https://github.com/pypi/warehouse/issues/14671,
   "webauthn>=1.0.0,<3.0.0",
   "whitenoise",
   "WTForms[email]>=2.0.0",
@@ -84,15 +84,15 @@ dependencies = [
 
 [project.optional-dependencies]
 deploy = [
-  "gunicorn==22.0.0",
-  "ddtrace==2.8.5"
+  "gunicorn==23.0.0",
+  "ddtrace==3.9.1"
 ]
 
 [tool.uv]
 dev-dependencies = [
   "Sphinx",
   "asyncudp>=0.7",
-  "black==24.4.2",
+  "black==25.1.0",
   "cairosvg",
   "celery-types",
   "coverage",
@@ -119,7 +119,7 @@ dev-dependencies = [
   "pretend",
   "pyramid_debugtoolbar>=2.5",
   "pytest-icdiff",
-  "pytest-postgresql>=3.1.3,<7.0.0",
+  "pytest-postgresql>=3.1.3,<7.1.0",
   "pytest-randomly",
   "pytest-socket",
   "pytest>=3.0.0",
@@ -142,7 +142,7 @@ dev-dependencies = [
   "types-python-slugify",
   "types-pytz",
   "types-redis",
-  "types-requests==2.31.0.6", # See https://github.com/pypi/warehouse/issues/14671
+  "types-requests==2.32.0.20250602", # See https://github.com/pypi/warehouse/issues/14671
   "types-setuptools",
   "types-stripe",
   "types-zxcvbn",
diff --git a/scripts/requirements/transformers/pyproject.toml b/scripts/requirements/transformers/pyproject.toml
index e247c2829..694383661 100644
--- a/scripts/requirements/transformers/pyproject.toml
+++ b/scripts/requirements/transformers/pyproject.toml
@@ -15,7 +15,7 @@ dependencies = [
     "pyyaml>=5.1",
     "regex!=2019.12.17",
     "requests",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "safetensors>=0.4.1",
     "tqdm>=4.27",
 ]
@@ -28,33 +28,33 @@ ja = [
     "unidic>=1.0.2",
     "sudachipy>=0.6.6",
     "sudachidict_core>=20220729",
-    "rhoknp>=1.1.0,<1.3.1"
+    "rhoknp>=1.1.0,<1.8.0"
 ]
 sklearn = ["scikit-learn"]
 tf = [
-    "tensorflow>=2.6,<2.16",
+    "tensorflow>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1"
 ]
 tf-cpu = [
-    "tensorflow-cpu>=2.6,<2.16",
+    "tensorflow-cpu>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1"
 ]
 torch = ["torch", "accelerate>=0.21.0"]
 accelerate = ["accelerate>=0.21.0"]
 retrieval = ["faiss-cpu", "datasets!=2.5.0"]
 flax = [
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
-    "flax>=0.4.1,<=0.7.0",
-    "optax>=0.0.8,<=0.1.4"
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
+    "flax>=0.4.1,<=0.9.0",
+    "optax>=0.0.8,<=0.2.4"
 ]
-tokenizers = ["tokenizers>=0.14,<0.19"]
+tokenizers = ["tokenizers>=0.14,<0.22"]
 ftfy = ["ftfy"]
 onnxruntime = ["onnxruntime>=1.4.0", "onnxruntime-tools>=1.4.2"]
 onnx = [
@@ -63,8 +63,8 @@ onnx = [
     "onnxruntime>=1.4.0",
     "onnxruntime-tools>=1.4.2"
 ]
-modelcreation = ["cookiecutter==1.7.3"]
-sagemaker = ["sagemaker==2.226.1"] # sagemaker>=2.31.0 # TODO(konsti)
+modelcreation = ["cookiecutter==2.6.0"]
+sagemaker = ["sagemaker==2.246.0"] # sagemaker>=2.31.0 # TODO(konsti)
 deepspeed = ["deepspeed>=0.9.3", "accelerate>=0.21.0"]
 optuna = ["optuna"]
 ray = ["ray[tune]>=2.7.0"]
@@ -92,27 +92,27 @@ vision = ["Pillow>=10.0.1,<=15.0"]
 timm = ["timm"]
 torch-vision = ["torchvision", "Pillow>=10.0.1,<=15.0"]
 # natten = ["natten>=0.14.6,<0.15.0"] # TODO(konsti)
-codecarbon = ["codecarbon==1.2.0"]
-video = ["decord==0.6.0", "av==9.2.0"]
+codecarbon = ["codecarbon==3.0.2"]
+video = ["decord==0.6.0", "av==14.4.0"]
 sentencepiece = ["sentencepiece>=0.1.91,!=0.1.92", "protobuf"]
 
 deepspeed-testing = [
     "deepspeed>=0.9.3",
     "accelerate>=0.21.0",
-    "pytest>=7.2.0,<8.0.0",
+    "pytest>=7.2.0,<8.5.0",
     "pytest-xdist",
     "timeout-decorator",
     "parameterized",
     "psutil",
     "datasets!=2.5.0",
-    "dill<0.3.5",
+    "dill<0.5.0",
     "evaluate>=0.2.0",
     "pytest-timeout",
-    "ruff==0.1.5",
-    "sacrebleu>=1.4.12,<2.0.0",
+    "ruff==0.11.13",
+    "sacrebleu>=1.4.12,<2.6.0",
     "rouge-score!=0.0.7,!=0.0.8,!=0.1,!=0.1.1",
     "nltk",
-    "GitPython<3.1.19",
+    "gitpython<3.2.0",
     "hf-doc-builder>=0.3.0",
     "protobuf",
     "sacremoses",
@@ -122,7 +122,7 @@ deepspeed-testing = [
     "pydantic",
     "faiss-cpu",
     "datasets!=2.5.0",
-    "cookiecutter==1.7.3",
+    "cookiecutter==2.6.0",
     "optuna",
     "sentencepiece>=0.1.91,!=0.1.92",
     "protobuf"
@@ -130,26 +130,26 @@ deepspeed-testing = [
 quality = [
     "datasets!=2.5.0",
     "isort>=5.5.4",
-    "ruff==0.1.5",
-    "GitPython<3.1.19",
+    "ruff==0.11.13",
+    "gitpython<3.2.0",
     "hf-doc-builder>=0.3.0",
-    "urllib3<2.0.0"
+    "urllib3<2.5.0"
 ]
 all = [
-    "tensorflow>=2.6,<2.16",
+    "tensorflow>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1",
     "torch",
     "accelerate>=0.21.0",
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
-    "flax>=0.4.1,<=0.7.0",
-    "optax>=0.0.8,<=0.1.4",
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
+    "flax>=0.4.1,<=0.9.0",
+    "optax>=0.0.8,<=0.2.4",
     "sentencepiece>=0.1.91,!=0.1.92",
     "protobuf",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "torchaudio",
     "librosa",
     "pyctcdecode>=0.4.0",
@@ -162,27 +162,27 @@ all = [
     "timm",
     "torchvision",
     "Pillow>=10.0.1,<=15.0",
-    "codecarbon==1.2.0",
+    "codecarbon==3.0.2",
     "accelerate>=0.21.0",
     "decord==0.6.0",
-    "av==9.2.0"
+    "av==14.4.0"
 ]
 docs_specific = ["hf-doc-builder"]
 docs = [
-    "tensorflow>=2.6,<2.16",
+    "tensorflow>=2.6,<2.20",
     "onnxconverter-common",
     "tf2onnx",
-    "tensorflow-text<2.16",
+    "tensorflow-text<2.20",
     "keras-nlp>=0.3.1",
     "torch",
     "accelerate>=0.21.0",
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
-    "flax>=0.4.1,<=0.7.0",
-    "optax>=0.0.8,<=0.1.4",
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
+    "flax>=0.4.1,<=0.9.0",
+    "optax>=0.0.8,<=0.2.4",
     "sentencepiece>=0.1.91,!=0.1.92",
     "protobuf",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "torchaudio",
     "librosa",
     "pyctcdecode>=0.4.0",
@@ -195,10 +195,10 @@ docs = [
     "timm",
     "torchvision",
     "Pillow>=10.0.1,<=15.0",
-    "codecarbon==1.2.0",
+    "codecarbon==3.0.2",
     "accelerate>=0.21.0",
     "decord==0.6.0",
-    "av==9.2.0",
+    "av==14.4.0",
     "hf-doc-builder"
 ]
 torchhub = [
@@ -212,7 +212,7 @@ torchhub = [
     "requests",
     "sentencepiece>=0.1.91,!=0.1.92",
     "torch",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "tqdm>=4.27"
 ]
 agents = [
@@ -226,27 +226,27 @@ agents = [
 ]
 
 dev-dependencies = [
-    "GitPython<3.1.19",
+    "gitpython<3.2.0",
     "Pillow>=10.0.1,<=15.0",
     "accelerate>=0.21.0",
-    "av==9.2.0",
+    "av==14.4.0",
     "beautifulsoup4",
-    "codecarbon==1.2.0",
-    "codecarbon==1.2.0",
-    "cookiecutter==1.7.3",
+    "codecarbon==3.0.2",
+    "codecarbon==3.0.2",
+    "cookiecutter==2.6.0",
     "datasets!=2.5.0",
     "decord==0.6.0",
-    "dill<0.3.5",
+    "dill<0.5.0",
     "evaluate>=0.2.0",
     "faiss-cpu",
-    "flax>=0.4.1,<=0.7.0",
+    "flax>=0.4.1,<=0.9.0",
     "fugashi>=1.0",
     "hf-doc-builder",
     "hf-doc-builder>=0.3.0",
     "ipadic>=1.0.0,<2.0",
     "isort>=5.5.4",
-    "jax>=0.4.1,<=0.4.13",
-    "jaxlib>=0.4.1,<=0.4.13",
+    "jax>=0.4.1,<=0.4.30",
+    "jaxlib>=0.4.1,<=0.4.30",
     "kenlm",
     "keras-nlp>=0.3.1",
     "librosa",
@@ -254,7 +254,7 @@ dev-dependencies = [
     "onnxconverter-common",
     "onnxruntime-tools>=1.4.2",
     "onnxruntime>=1.4.0",
-    "optax>=0.0.8,<=0.1.4",
+    "optax>=0.0.8,<=0.2.4",
     "optuna",
     "parameterized",
     "phonemizer",
@@ -264,13 +264,13 @@ dev-dependencies = [
     "pydantic",
     "pytest-timeout",
     "pytest-xdist",
-    "pytest>=7.2.0,<8.0.0",
+    "pytest>=7.2.0,<8.5.0",
     "ray[tune]>=2.7.0",
-    "rhoknp>=1.1.0,<1.3.1",
+    "rhoknp>=1.1.0,<1.8.0",
     "rjieba",
     "rouge-score!=0.0.7,!=0.0.8,!=0.1,!=0.1.1",
-    "ruff==0.1.5",
-    "sacrebleu>=1.4.12,<2.0.0",
+    "ruff==0.11.13",
+    "sacrebleu>=1.4.12,<2.6.0",
     "sacremoses",
     "scikit-learn",
     "sentencepiece>=0.1.91,!=0.1.92",
@@ -278,18 +278,18 @@ dev-dependencies = [
     "sudachidict_core>=20220729",
     "sudachipy>=0.6.6",
     "tensorboard",
-    "tensorflow-text<2.16",
-    "tensorflow>=2.6,<2.16",
+    "tensorflow-text<2.20",
+    "tensorflow>=2.6,<2.20",
     "tf2onnx",
     "timeout-decorator",
     "timm",
-    "tokenizers>=0.14,<0.19",
+    "tokenizers>=0.14,<0.22",
     "torch",
     "torchaudio",
     "torchvision",
     "unidic>=1.0.2",
     "unidic_lite>=1.0.7",
-    "urllib3<2.0.0"
+    "urllib3<2.5.0"
 ]
 
 [build-system]
diff --git a/scripts/workspaces/albatross-project-in-excluded/packages/seeds/pyproject.toml b/scripts/workspaces/albatross-project-in-excluded/packages/seeds/pyproject.toml
index 71d0272ed..b4d3904d9 100644
--- a/scripts/workspaces/albatross-project-in-excluded/packages/seeds/pyproject.toml
+++ b/scripts/workspaces/albatross-project-in-excluded/packages/seeds/pyproject.toml
@@ -2,7 +2,7 @@
 name = "seeds"
 version = "1.0.0"
 requires-python = ">=3.12"
-dependencies = ["idna==3.6"]
+dependencies = ["idna==3.10"]
 
 [build-system]
 requires = ["hatchling"]
diff --git a/scripts/workspaces/albatross-root-workspace/packages/seeds/pyproject.toml b/scripts/workspaces/albatross-root-workspace/packages/seeds/pyproject.toml
index f63b97736..1022fab1b 100644
--- a/scripts/workspaces/albatross-root-workspace/packages/seeds/pyproject.toml
+++ b/scripts/workspaces/albatross-root-workspace/packages/seeds/pyproject.toml
@@ -2,7 +2,7 @@
 name = "seeds"
 version = "1.0.0"
 requires-python = ">=3.12"
-dependencies = ["idna==3.6"]
+dependencies = ["idna==3.10"]
 
 [build-system]
 requires = ["hatchling"]
diff --git a/scripts/workspaces/albatross-virtual-workspace/packages/seeds/pyproject.toml b/scripts/workspaces/albatross-virtual-workspace/packages/seeds/pyproject.toml
index f63b97736..1022fab1b 100644
--- a/scripts/workspaces/albatross-virtual-workspace/packages/seeds/pyproject.toml
+++ b/scripts/workspaces/albatross-virtual-workspace/packages/seeds/pyproject.toml
@@ -2,7 +2,7 @@
 name = "seeds"
 version = "1.0.0"
 requires-python = ">=3.12"
-dependencies = ["idna==3.6"]
+dependencies = ["idna==3.10"]
 
 [build-system]
 requires = ["hatchling"]

reneleonhardt · 2025-06-10T18:55:19Z

uv upgrade --recursive --types=prod,dev,extra,group

chirizxc · 2025-08-31T13:44:53Z

Hi, maybe make this PR code as a separate package? like https://github.com/nyudenkov/pysentry?

Alan-Chen99 · 2025-11-02T18:07:21Z

This seems to only upgrade upper bounds and not lower bounds; Is this the intended behavior?

reneleonhardt · 2025-11-05T14:24:18Z

This seems to only upgrade upper bounds and not lower bounds; Is this the intended behavior?

In general, yes: It extends the previous upper bound to include a higher version.

Your app depends on numpy > 0, < 2
uv upgrade bumps this to numpy > 0, < 3 # to include 2.x
If your CI breaks, or otherwise necessary or recommended in the release notes, you migrate your code to adapt to the new version
If the migrated code would not be compatible to the lower bound anymore, you bump the lower bound manually to numpy >= 2, < 3 to deny 1.x

reneleonhardt temporarily deployed to release June 9, 2025 20:36 — with GitHub Actions Inactive

reneleonhardt mentioned this pull request Jun 9, 2025

Upgrade dependencies in pyproject.toml (uv upgrade) #6794

Open

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from ba17387 to da3d200 Compare June 9, 2025 21:16

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konstin marked this pull request as draft June 10, 2025 09:51

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from 0008e6d to 1d8cd5f Compare June 10, 2025 18:42

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reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from 39106db to 3e71094 Compare August 15, 2025 13:19

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reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch 3 times, most recently from 68ae4f1 to 9ed1ef9 Compare September 23, 2025 05:55

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from 9ed1ef9 to 8c8ace3 Compare September 27, 2025 12:21

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch 2 times, most recently from 2a86b5e to 792d07e Compare October 13, 2025 08:25

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from 792d07e to cdbf28b Compare October 18, 2025 07:41

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from cdbf28b to 41dbc30 Compare November 6, 2025 09:00

reneleonhardt added 13 commits November 21, 2025 09:39

feat: upgrade dependencies in pyproject.toml

066a3a2

fix tests

351d432

feature: UV_UPGRADE_RECURSIVE=true or --recursive

cc26d7c

feature: --types=prod,dev,extra,group

c5a979b

Show changed semver digit (1=major, 2=minor, 3=patch, 4=build number)

91a8b75

UV_UPGRADE_ALLOW or --allow=1,2,3,4 filters version digits

c6c89b1

fetch latest versions in parallel

f025829

support refresh args (default: cache for 10 minutes)

ec01020

group fetches by requires-python

ef859e8

use requires-python of tool.uv.dependency-groups

86369ad

--packages-only

03cc128

fix tilde equal

f42c1e6

fix generate-all

d8e3df7

reneleonhardt force-pushed the feat/upgrade-pyproject-toml branch from 41dbc30 to d8e3df7 Compare November 21, 2025 08:55

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feat: upgrade dependencies in pyproject.toml #13934

feat: upgrade dependencies in pyproject.toml #13934

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reneleonhardt commented Jun 9, 2025 •

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reneleonhardt commented Jun 9, 2025 •

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reneleonhardt commented Nov 5, 2025 •

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