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v0.4.1

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@lomereiter lomereiter released this 29 Oct 21:00
· 744 commits to master since this release
v0.4.1
a6bbf45

  • Integrated new BAM reader (less use of garbage collector => better scaling on multicore).

    The effect is most visible on view -c and flagstat when running multiple threads.

  • index tool collects statistics readable by samtools idxstats

  • Optional check during indexing that bins are computed correctly

  • Fixed a long-standing bug: -f json outputted SAM instead of JSON

sambamba_v0.4.1_centos5.tar.bz2 was built with LDC 0.11.0 while
sambamba_v0.4.1b_centos5.tar.bz2 was built with LDC 0.12.0

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