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N.N.NPlaceholder for high confidence futuresPlaceholder for high confidence futuresdraftingdrafting schema requirementsdrafting schema requirementsschemaCELLxGENE Discover dataset schemaCELLxGENE Discover dataset schemaspeciesAdding new species to CELLxGENEAdding new species to CELLxGENE
Description
Context
Request to add:
- Coturnix japonica
- Anolis carolinensis (pending issue with two duplicate genes)
- Alligator mississippiensis
- Chrysemys picta bellii
- Ranitomeya imitator
- Monodelphis domestica
including support for multiome which requires the generation of chromosome table from fasta references.
Design
Pending
Required Gene Annotations
uns (Dataset Metadata)
organism_ontology_term_id
var and raw.var (Gene Metadata)
feature_reference
scATAC-seq assets
Requirements
Currently, the chromosome tables are inlined. Other options must be considered as the number of tables increases.
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N.N.NPlaceholder for high confidence futuresPlaceholder for high confidence futuresdraftingdrafting schema requirementsdrafting schema requirementsschemaCELLxGENE Discover dataset schemaCELLxGENE Discover dataset schemaspeciesAdding new species to CELLxGENEAdding new species to CELLxGENE