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@boegel boegel commented Jan 16, 2022

(created using eb --new-pr)

We should stick to Java/11 here, since that's already used as a dependency in the 2021b generation of easyconfigs (in R-4.1.2-foss-2021b.eb for example).

Otherwise we run into trouble like (from #14724):

found 2 variants of 'Java' dependency in easyconfigs using 'GCCcore-11.2' toolchain generation
* version: 11; versionsuffix:  as dep for set(['ANTLR-2.7.7-GCCcore-11.2.0-Java-11.eb', 'canu-2.2-GCCcore-11.2.0.eb', 'GATK-4.2.3.0-GCCcore-11.2.0-Java-11.eb'])
* version: 15; versionsuffix:  as dep for set(['Bazel-3.7.2-GCCcore-11.2.0.eb'])

cc @surak, @SebastianAchilles

@boegel boegel added the change label Jan 16, 2022
@boegel boegel added this to the next release (4.5.2?) milestone Jan 16, 2022
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boegel commented Jan 16, 2022

@boegelbot please test @ generoso

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boegel commented Jan 16, 2022

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3502.doduo.os - Linux RHEL 8.2, x86_64, AMD EPYC 7552 48-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/ea6d8bfb9b48ebbcd8e5c83443f620a6 for a full test report.

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@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=14734 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_14734 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 7730

Test results coming soon (I hope)...

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- notification for comment with ID 1013898904 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegel commented Jan 16, 2022

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node2643.swalot.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz (haswell), Python 3.6.8
See https://gist.github.com/0d0d6d57392f1dd1db4cfdfded122873 for a full test report.

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns2 - Linux rocky linux 8.4, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/8210502942c39a950782eb5f87cc5b2c for a full test report.

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@boegelbot please test @ jsc-zen2

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@SebastianAchilles: Request for testing this PR well received on jsfl1.int.jusuf.sebastian.cluster

PR test command 'EB_PR=14734 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_14734 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 1535

Test results coming soon (I hope)...

Details

- notification for comment with ID 1013904360 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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lgtm

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Test report by @SebastianAchilles
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
skylake-rocky8-eb - Linux rocky linux 8.5, x86_64, Intel(R) Core(TM) i7-8700 CPU @ 3.20GHz (skylake), Python 3.6.8
See https://gist.github.com/1d3693f1e9f56f760ab4cf1101ca9daf for a full test report.

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsfc01.int.jusuf.sebastian.cluster - Linux rocky linux 8.4, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/986c616a3529f2e4e681b0467fe6e53d for a full test report.

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Going in, thanks @boegel!

@SebastianAchilles SebastianAchilles merged commit 829116c into easybuilders:develop Jan 16, 2022
@boegel boegel deleted the 20220116163858_new_pr_Bazel372 branch January 16, 2022 18:13
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3 participants