{math}[foss/2022a] rustworkx v0.12.1 w/ Python 3.10.4 #17857

Micket · 2023-05-04T15:09:36Z

(created using eb --new-pr)

new cargo easyblock new generic easyblock for installing Rust crates with cargo: Cargo and CargoPythonPackage easybuild-easyblocks#2902
enhance Cargo constructor to avoid processing list of crates multiple times into sources easybuild-easyblocks#2934

verdurin · 2023-05-05T09:32:13Z

Test report by @verdurin
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2902
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/f3c25caad0fb66f3949b8933e863f56c for a full test report.

verdurin · 2023-05-05T09:33:39Z

 error: failed to get `ahash` as a dependency of package `rustworkx-core v0.12.1 (/dev/shm/rustworkx/0.12.1/foss-2022a/rustworkx-0.12.1/rustworkx-core)`

  Caused by:
    failed to load source for dependency `ahash`

  Caused by:
    Unable to update registry `crates-io`

  Caused by:
    failed to update replaced source registry `crates-io`

  Caused by:
    failed to read root of directory source: /dev/shm/rustworkx/0.12.1/foss-2022a/vendored-sources

  Caused by:
    No such file or directory (os error 2)

Micket · 2023-05-05T09:34:27Z

@verdurin could you do me a favor and check what you have in

ls -a /dev/shm/rustworkx/0.12.1/foss-2022a/

and

cat /dev/shm/rustworkx/0.12.1/foss-2022a/.cargo/config.toml

verdurin · 2023-05-05T09:35:12Z

$ ls -a /dev/shm/rustworkx/0.12.1/foss-2022a/
.                        fixedbitset-0.4.2     memchr-2.5.0        parking_lot_core-0.8.5      rand-0.8.5            serde_derive-1.0.145
..                       getrandom-0.2.6       memoffset-0.6.5     petgraph-0.6.2              rand_chacha-0.3.1     serde_json-1.0.89
ahash-0.7.6              hashbrown-0.11.2      ndarray-0.13.1      ppv-lite86-0.2.16           rand_core-0.6.3       smallvec-1.8.0
autocfg-1.1.0            hermit-abi-0.1.19     num-bigint-0.4.3    priority-queue-1.2.0        rand_pcg-0.3.1        syn-1.0.96
bitflags-1.3.2           indexmap-1.7.0        num-complex-0.2.4   proc-macro2-1.0.39          rawpointer-0.2.1      target-lexicon-0.12.4
.cargo                   indoc-1.0.6           num-complex-0.4.1   pyo3-0.17.3                 rayon-1.5.3           unicode-ident-1.0.0
cfg-if-1.0.0             instant-0.1.12        num_cpus-1.13.1     pyo3-build-config-0.17.3    rayon-core-1.9.3      unindent-0.1.9
crossbeam-channel-0.5.4  itoa-1.0.2            num-integer-0.1.45  pyo3-ffi-0.17.3             redox_syscall-0.2.13  version_check-0.9.4
crossbeam-deque-0.8.1    lazy_static-1.4.0     numpy-0.17.2        pyo3-macros-0.17.3          rustworkx-0.12.1      wasi-0.10.2+wasi-snapshot-preview1
crossbeam-epoch-0.9.8    libc-0.2.126          num-traits-0.2.15   pyo3-macros-backend-0.17.3  ryu-1.0.10            winapi-0.3.9
crossbeam-utils-0.8.8    lock_api-0.4.7        once_cell-1.12.0    quick-xml-0.22.0            scopeguard-1.1.0      winapi-i686-pc-windows-gnu-0.4.0
either-1.6.1             matrixmultiply-0.2.4  parking_lot-0.11.2  quote-1.0.18                serde-1.0.145         winapi-x86_64-pc-windows-gnu-0.4.0

verdurin · 2023-05-05T09:35:33Z

$ cat /dev/shm/rustworkx/0.12.1/foss-2022a/.cargo/config.toml
[source.vendored-sources]
directory = "/dev/shm/rustworkx/0.12.1/foss-2022a"

[source.crates-io]
directory = "vendored-sources"

Micket · 2023-05-05T15:04:23Z

Test report by @Micket
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
vera-c1 - Linux Rocky Linux 8.7, x86_64, Intel Xeon Processor (Skylake), Python 3.6.8
See https://gist.github.com/Micket/b7888d1ee415c13835f359a7f4cf58d8 for a full test report.

Micket · 2023-05-05T15:13:55Z

Test report by @Micket
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2902
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
vera-c1 - Linux Rocky Linux 8.7, x86_64, Intel Xeon Processor (Skylake), Python 3.6.8
See https://gist.github.com/Micket/8a9ac32cc23f31674543f16151821c4e for a full test report.

Micket · 2023-05-05T15:45:51Z

@verdurin easyblock had a bug i introduced, fixed now. directory = "vendored-sources" should have been replace-with = "vendored-sources"

Micket · 2023-05-05T15:46:22Z

@boegelbot please test @ generoso
EB_ARGS="--include-easyblocks-from-pr 2902"

boegelbot · 2023-05-05T15:50:08Z

@Micket: Request for testing this PR well received on login1

PR test command 'EB_PR=17857 EB_ARGS="--include-easyblocks-from-pr 2902" EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17857 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 10752

Test results coming soon (I hope)...

Details

- notification for comment with ID 1536447715 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2023-05-05T15:54:55Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2902
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/2fd020fa371978f07d7b850ecc3d8136 for a full test report.

Micket · 2023-05-10T16:44:12Z

Test report by @Micket
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2902
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
vera-c1 - Linux Rocky Linux 8.7, x86_64, Intel Xeon Processor (Skylake), Python 3.6.8
See https://gist.github.com/Micket/7ba5783587904c958c190e0e756eec24 for a full test report.

jfgrimm · 2023-05-15T13:01:26Z

Test report by @jfgrimm
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2902
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node068.pri.viking.alces.network - Linux CentOS Linux 7.9.2009, x86_64, Intel(R) Xeon(R) Gold 6138 CPU @ 2.00GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/jfgrimm/6224db96843d98bc753d5670b9779c55 for a full test report.

boegel · 2023-05-23T21:04:13Z

Test report by @boegel
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2902
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3165.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/c4152221e9a367ad6f14457a892450a9 for a full test report.

boegel · 2023-05-24T14:59:47Z

@boegelbot please test @ generoso
EB_ARGS="--include-easyblocks-from-pr 2934"

boegelbot · 2023-05-24T15:00:15Z

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=17857 EB_ARGS="--include-easyblocks-from-pr 2934" EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17857 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 10865

Test results coming soon (I hope)...

Details

- notification for comment with ID 1561323311 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2023-05-24T15:05:23Z

Test report by @boegelbot
Using easyblocks from PR(s) easybuilders/easybuild-easyblocks#2934
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/bb8470c5ebd14a13b70ebb2a715f232b for a full test report.

…, since it inherits a decent sanity_check_paths from PythonPackage

boegel

lgtm

boegel · 2023-05-24T16:18:13Z

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3165.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/7ffa0ec072864b91d43c74dba5693238 for a full test report.

boegel · 2023-05-24T16:37:03Z

Going in, thanks @Micket!

adding easyconfigs: rustworkx-0.12.1-foss-2022a.eb

6e32e71

Micket added the new label May 4, 2023

jfgrimm added this to the 4.x milestone May 4, 2023

Micket mentioned this pull request May 4, 2023

{lib}[foss/2022a] SnapATAC2 v2.3.0 w/ Python 3.10.4 #17858

Closed

1 task

boegel modified the milestones: 4.x, next release (4.7.2) May 23, 2023

boegel mentioned this pull request May 24, 2023

new generic easyblock for installing Rust crates with cargo: Cargo and CargoPythonPackage easybuilders/easybuild-easyblocks#2902

Merged

easybuilders deleted a comment from boegelbot May 24, 2023

don't require custom sanity_check_paths when using CargoPythonPackage…

7bfaeaa

…, since it inherits a decent sanity_check_paths from PythonPackage

boegel approved these changes May 24, 2023

View reviewed changes

boegel merged commit b8fdb95 into easybuilders:develop May 24, 2023

Micket deleted the 20230504170931_new_pr_rustworkx0121 branch October 11, 2023 21:43

{math}[foss/2022a] rustworkx v0.12.1 w/ Python 3.10.4 #17857

{math}[foss/2022a] rustworkx v0.12.1 w/ Python 3.10.4 #17857

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Micket commented May 4, 2023 •

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