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25 changes: 25 additions & 0 deletions easybuild/easyconfigs/g/GTS/GTS-0.7.6-intel-2017a.eb
Original file line number Diff line number Diff line change
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easyblock = 'ConfigureMake'

name = 'GTS'
version = '0.7.6'

homepage = 'http://gts.sourceforge.net/'
description = """GTS stands for the GNU Triangulated Surface Library.
It is an Open Source Free Software Library intended to provide a set of useful
functions to deal with 3D surfaces meshed with interconnected triangles."""

toolchain = {'name': 'intel', 'version': '2017a'}

source_urls = [SOURCEFORGE_SOURCE]
sources = [SOURCELOWER_TAR_GZ]

dependencies = [
('GLib', '2.52.0'),
]

sanity_check_paths = {
'files': ['lib/libgts.%s' % SHLIB_EXT, 'bin/gts2oogl', 'bin/gtscheck'],
'dirs': []
}

moduleclass = 'vis'
67 changes: 67 additions & 0 deletions easybuild/easyconfigs/g/Graphviz/Graphviz-2.40.1-intel-2017a.eb
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easyblock = 'ConfigureMake'

name = 'Graphviz'
version = '2.40.1'

homepage = 'http://www.graphviz.org/'
description = """Graphviz is open source graph visualization software. Graph visualization
is a way of representing structural information as diagrams of
abstract graphs and networks. It has important applications in networking,
bioinformatics, software engineering, database and web design, machine learning,
and in visual interfaces for other technical domains."""

toolchain = {'name': 'intel', 'version': '2017a'}

source_urls = ['http://www.graphviz.org/pub/graphviz/stable/SOURCES/']
sources = [SOURCELOWER_TAR_GZ]

dependencies = [
('cairo', '1.14.8'),
('expat', '2.2.0'),
('freetype', '2.7.1'),
('Ghostscript', '9.21'),
('GTS', '0.7.6'),
('Java', '1.8.0_131', '', True),
('libpng', '1.6.29'),
('Pango', '1.40.5'),
('Perl', '5.24.1'),
('Qt', '4.8.7'),
('Tcl', '8.6.6'),
('zlib', '1.2.11'),
]

builddependencies = [
('M4', '1.4.18'),
('SWIG', '3.0.12', '-Python-2.7.13'),
]

patches = [
'Graphviz-2.38.0_icc_vmalloc.patch',
'Graphviz-2.38.0_icc_sfio.patch',
]

preconfigopts = "sed -i 's/install-data-hook$//g' tclpkg/Makefile.in && "
configopts = '--enable-guile=no --enable-lua=no --enable-ocaml=no '
configopts += '--enable-r=no --enable-ruby=no '

prebuildopts = 'qmake -o cmd/gvedit/qMakefile cmd/gvedit/gvedit.pro && '

sanity_check_paths = {
'files': ['bin/cluster', 'bin/dot', 'bin/gvmap',
'lib/libcdt.%s' % SHLIB_EXT, 'lib/libgvc.%s' % SHLIB_EXT, 'lib/libxdot.%s' % SHLIB_EXT],
'dirs': ['include', 'lib/graphviz']
}

sanity_check_commands = [
("test ! -d $EBROOTTCL/lib/*/graphviz", ''),
("test ! -d $EBROOTTCL/lib64/*/graphviz", ''),
]

modextrapaths = {
'PYTHONPATH': 'lib/graphviz/python',
'CLASSPATH': 'lib/graphviz/java/org/graphviz',
'LD_LIBRARY_PATH': 'lib/graphviz/java',
'TCLLIBPATH': 'lib/graphviz/tcl',
}

moduleclass = 'vis'
Original file line number Diff line number Diff line change
@@ -0,0 +1,25 @@
easyblock = 'PythonPackage'

name = 'graphviz'
version = '0.7.1'
versionsuffix = '-Python-%(pyver)s'

homepage = 'https://pypi.python.org/pypi/graphviz'
description = """Simple Python interface for Graphviz"""

toolchain = {'name': 'intel', 'version': '2017a'}

source_urls = [PYPI_SOURCE]
sources = [SOURCE_ZIP]

dependencies = [
('Python', '2.7.13'),
('Graphviz', '2.40.1'),
]

sanity_check_paths = {
'files': [],
'dirs': ['lib/python%(pyshortver)s/site-packages'],
}

moduleclass = 'vis'
Original file line number Diff line number Diff line change
@@ -0,0 +1,38 @@
name = 'MXNet'
version = '0.9.3'
versionsuffix = '-Python-%(pyver)s-R-%(rver)s'

homepage = 'http://mxnet.io/'
description = """Flexible and Efficient Library for Deep Learning"""

toolchain = {'name': 'foss', 'version': '2016b'}
toolchainopts = {'cstd': 'c++11', 'opt': True, 'pic': True, 'openmp': True}

source_urls = ['https://github.com/dmlc/mxnet/archive']

# MXNet pulls in a bunch of submodules which don't have releases.
# We download the current HEAD of the repos at the current time (13/03/17)
sources = [
'v%(version)s.tar.gz', # MXNet
'https://github.com/dmlc/ps-lite/archive/6856021ca925c7.tar.gz', # ps-lite
'https://github.com/dmlc/mshadow/archive/c29ac58320d7b0.tar.gz', # mshadow
'https://github.com/dmlc/nnvm/archive/0d64855f741e04.tar.gz', # nnvm
'https://github.com/dmlc/dmlc-core/archive/b32ec4aee65a66.tar.gz', # dmlc-core
]

checksums = [
"84971e4a0e2e9db3757623657aa5b9ec", # v0.9.3.tar.gz
"12c96664978c545a7269b93635719b18", # 6856021ca925c7.tar.gz
"3dc48183e123c650707bcf26a9254941", # c29ac58320d7b0.tar.gz
"fb04cb1694f1e66591a31a18bc92b451", # 0d64855f741e04.tar.gz
"da873c881758c0e10ac0928f86568456", # b32ec4aee65a66.tar.gz
]

dependencies = [
('Python', '2.7.12'),
('graphviz', '0.5.1', '-Python-%(pyver)s'),
('OpenCV', '3.1.0'),
('R', '3.3.3', '-X11-20160819'),
]

moduleclass = 'math'
Original file line number Diff line number Diff line change
@@ -0,0 +1,38 @@
name = 'MXNet'
version = '0.9.3'
versionsuffix = '-Python-%(pyver)s-R-%(rver)s'

homepage = 'http://mxnet.io/'
description = """Flexible and Efficient Library for Deep Learning"""

toolchain = {'name': 'intel', 'version': '2017a'}
toolchainopts = {'cstd': 'c++11', 'opt': True, 'pic': True, 'openmp': True}

source_urls = ['https://github.com/dmlc/mxnet/archive']

# MXNet pulls in a bunch of submodules which don't have releases.
# We download the current HEAD of the repos at the current time (13/03/17)
sources = [
'v%(version)s.tar.gz', # MXNet
'https://github.com/dmlc/ps-lite/archive/6856021ca925c7.tar.gz', # ps-lite
'https://github.com/dmlc/mshadow/archive/c29ac58320d7b0.tar.gz', # mshadow
'https://github.com/dmlc/nnvm/archive/0d64855f741e04.tar.gz', # nnvm
'https://github.com/dmlc/dmlc-core/archive/b32ec4aee65a66.tar.gz', # dmlc-core
]

checksums = [
"84971e4a0e2e9db3757623657aa5b9ec", # v0.9.3.tar.gz
"12c96664978c545a7269b93635719b18", # 6856021ca925c7.tar.gz
"3dc48183e123c650707bcf26a9254941", # c29ac58320d7b0.tar.gz
"fb04cb1694f1e66591a31a18bc92b451", # 0d64855f741e04.tar.gz
"da873c881758c0e10ac0928f86568456", # b32ec4aee65a66.tar.gz
]

dependencies = [
('Python', '2.7.13'),
('graphviz', '0.7.1', '-Python-%(pyver)s'),
('OpenCV', '3.2.0'),
('R', '3.4.0', '-X11-20170314'),
]

moduleclass = 'math'
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ description = """SWIG is a software development tool that connects programs writ
a variety of high-level programming languages."""

toolchain = {'name': 'intel', 'version': '2017a'}
toolchainopts = {'pic': True}
toolchainopts = {'pic': True, 'opt': True, 'optarch': True}
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@wpoely86 these are enabled by default, no point in adding them?

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sorry, wrong file added. Too many files in my repo


source_urls = [SOURCEFORGE_SOURCE]
sources = [SOURCELOWER_TAR_GZ]
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