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Pull requests: fls-bioinformatics-core/auto_process_ngs
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WIP Add data fetching utility for e.g. Visium images
Data transfer
new functionality
WIP
Work in progress
#1057
opened May 23, 2025 by
pjbriggs
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4 tasks
Update 'InferExperiment' class in 'qc/apps/rseqc' to handle unknown data type
bugfix
qc metrics
WIP
Work in progress
#1055
opened May 23, 2025 by
pjbriggs
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Reimplement 'Settings' class using generic base class
configuration
enhancement
refactoring
#1044
opened May 8, 2025 by
pjbriggs
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Specify a conda package for 'bcl2fastq' in Fastq generation pipeline
enhancement
Fastq generation
#1043
opened May 1, 2025 by
pjbriggs
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Enable 'pipeliner' tasks to be forced to run even if preceeding tasks have failed
new functionality
pipeliner
#948
opened Feb 21, 2024 by
pjbriggs
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