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Given that we have some preliminary data on TCRs being MC38B reactive, we would like to explore their respective targets. For this, we need to
- get the cell line sequenced against our B6 host (as normal) (Get MC38B cell line RNA- and WEX-sequenced #5)
- knock out either H2Kb or H2Db and test these variants against our TCRs to see if either of them will eliminate the cytotoxicity (Knock H2Kb and H2Db out from MC38Bs #6)
- try previously described MC38 tetramers on the cells (Try to see if our MC38B TCRs can recognize previously described epitope candidates #7)
- adopt a DNA-library-based presentation system (e.g. PresentER) to screen for hundreds of candidates
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