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Addition of Yaml in input #1

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Merged
merged 4 commits into from
Apr 8, 2025
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Maaraujo-nv
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Added yaml_name as a configurable option. Allows to give different yaml paths for channels within the same task

- **convert_hcs_drogon_init_task.py**:
  1. Added `yaml_path` attribute to `DrogonPlateInputModel` class.
  2. Included explanation for the new attribute to be displayed in the Fractal web interface.
  3. Updated `_tiled_images = parse_drogon_metadata` to include YAML file parsing.

- **Parser.py**:
  1. Modified `find_channels_meta` function to include `yaml_name` as an input.
  2. Added `FileNotFoundError` handling for missing YAML files.

Fix spelling mistake in convert_hcs_drogon_init_task.py
- Fixed spelling mistake: Changed "drgon" to "drogon" (line 22).
- **README.md**:
  1. Updated Python running command:
     - Added `yaml_name` as a configurable option.
     - Included `yaml` as a new input in the `parallelization_list` example.
  2. Added YAML as a new input in the function example.

- **{}_FRACTAL_MANIFEST__.json**:
  - Ran `create_manifest` to update the JSON schema for the Fractal web interface.
@lorenzocerrone
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we need to pin zarr version untill this fixed
zarr-developers/zarr-python#2963

@lorenzocerrone lorenzocerrone merged commit b1f0c48 into lorenzocerrone:main Apr 8, 2025
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2 participants