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Work around memory and performance issues with xarray indexing #21

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Merged
merged 3 commits into from
Mar 18, 2021

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In testing the ag3.snp_calls() method with site filters applied, some memory and performance issues have come up (pydata/xarray#5054). This PR has a temporary workaround.

@alimanfoo alimanfoo merged commit 10c5113 into master Mar 18, 2021
@alimanfoo alimanfoo deleted the xarray-hacks-20210318 branch March 18, 2021 18:20
kathryn1995 pushed a commit to kathryn1995/malariagen-data-python that referenced this pull request Oct 5, 2021
Work around memory and performance issues with xarray indexing
@alimanfoo alimanfoo added the BMGF-001927 Work supported by BMGF grant INV-001927 (MalariaGEN 2019-2024). label Dec 4, 2024
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BMGF-001927 Work supported by BMGF grant INV-001927 (MalariaGEN 2019-2024).
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