Pytest fails to use the correct conda environment path for testing #19069
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Sample repo under https://github.com/1vecera/errorPytest |
karthiknadig
added
bug
karrtikr
added
investigating
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Thanks for the detailed logs, meanwhile I reproduce it can you try running the command which failed in terminal and see what happens: Make sure to expand the Please check results in both VSCode terminal and an external terminal. |
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Powershell, my default shell, fails both within VSCode and externally. Simple comand line without activation runs: Opening command in VSCode runs a conda activate script and pytest seems to pick up the wrong environment (pre-3.9 so it results in a import errors) |
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Thank you for the details. It seems you likely launched VSCode from an activated terminal? There is an issue with |
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@karrtikr I've launched using right-click open with code and selecting the environment, should I test it with opening PowerShell, activating my env. and launching using code . command? |
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Anything I can do? |
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Apologies for the delayed reply. Summarizing the discussion:
This is due to the bug mentioned in #19069 (comment).
This is also due to bug mentioned above, where running
I assume you're referring to Command prompt. The case I would like you to test:
Some more information I need for the VSCode terminal where
Thanks :) |
karrtikr
added
triage-needed
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I have this same problem, but in wsl. The conda environment name is dev162 located at "/home/aravia1/miniconda3/envs/dev162/" but it is looking for the environment at "/home/aravia1/miniconda3/envs/dev162/envs/dev162" and fails. Experiment 'pythonaacf' is active
LSP Notebooks experiment is enabled
LSP Notebooks interactive window support is enabled
Python interpreter path: ~/miniconda3/envs/dev162/bin/python
Starting Pylance language server.
> conda info --json
> conda run -n dev162 --no-capture-output python ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/printEnvVariables.py
> conda run -n dev162 --no-capture-output python ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir . -s --cache-clear tests
cwd: .
[ERROR 2022-7-24 11:58:52.839]: Error discovering pytest tests:
[n [Error]:
EnvironmentLocationNotFound: Not a conda environment: /home/aravia1/miniconda3/envs/dev162/envs/dev162
at ChildProcess.<anonymous> (/home/aravia1/.vscode-server/extensions/ms-python.python-2022.12.1/out/client/extension.js:2:238622)
at Object.onceWrapper (node:events:510:26)
at ChildProcess.emit (node:events:390:28)
at maybeClose (node:internal/child_process:1064:16)
at Process.ChildProcess._handle.onexit (node:internal/child_process:301:5)]
> conda info --jsonAs weird as it sounds, i just tried creating a symlink at the path "/home/aravia1/miniconda3/envs/dev162/envs/dev162" and the tests gets discovered 🤷. Symlink: ln -s ~/miniconda3/envs/dev162/ ~/miniconda3/envs/dev162/envs/dev162Successful test discovery: > conda run -n dev162 --no-capture-output python ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/printEnvVariables.py
> conda run -n dev162 --no-capture-output python ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server/extensions/ms-python.python-2022.12.1/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir . -s --cache-clear tests
cwd: . |
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Hello! Unfortunately, I'm having the same issue in a few workspaces. It is occurring in macOS as well as ubuntu 20.04 with code-insiders and python extension v2022.12.1. Also happens when using the remote-SSH extension, but it's not exclusive to that scenario. Can be tested with this repository. Python extension output: Experiment 'pythonaa' is active
LSP Notebooks experiment is enabled
LSP Notebooks interactive window support is enabled
> conda info --json
> /usr/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /usr/bin/python3 ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /usr/include/python3.6 ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /usr/include/python3.7 ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
[ERROR 2022-7-31 2:27:34.462]: [Error: Command failed: /usr/include/python3.6 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
/bin/sh: 1: /usr/include/python3.6: Permission denied
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Socket.<anonymous> (node:internal/child_process:451:11)
at Socket.emit (node:events:526:28)
at Pipe.<anonymous> (node:net:687:12)] {
killed: false,
code: 126,
signal: null,
cmd: '/usr/include/python3.6 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py'
}
[ERROR 2022-7-31 2:27:34.467]: [Error: Command failed: /usr/include/python3.7 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
/bin/sh: 1: /usr/include/python3.7: Permission denied
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Socket.<anonymous> (node:internal/child_process:451:11)
at Socket.emit (node:events:526:28)
at Pipe.<anonymous> (node:net:687:12)] {
killed: false,
code: 126,
signal: null,
cmd: '/usr/include/python3.7 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py'
}
> /anaconda/envs/aisc/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/alae/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/archai/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/ddm/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
Python interpreter path: /anaconda/envs/ddm/bin/python
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/printEnvVariables.py
> /anaconda/envs/audio/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/audiotf2/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/azureml_py36_automl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/azureml_py36_pytorch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/azureml_py36_tensorflow/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai-batch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai-preview/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai-scg-latest/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/brain/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/cleanrl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/clip-dalle/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/clip-featureviz/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/coinbot/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/colab/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/d3rl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/dalle/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/data2sim/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/ddm3/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/dmcontrol/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/dvc/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/hfcourse/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/iglu/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/jpylb/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/jupy/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/mineiglurl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/minerl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/modelcard/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/nlu/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/parsing/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/py37_default/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/py37_pytorch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/py37_tensorflow/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/ray/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/repsol/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/rl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/rlex/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/rlydoe/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/sbi/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/timeformers/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /anaconda/envs/torch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
> /bin/bash ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
[ERROR 2022-7-31 2:27:46.530]: Error: Command failed: /bin/bash /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py: line 4: import: command not found
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py: line 5: import: command not found
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py: line 10: syntax error near unexpected token `">>>PYTHON-EXEC-OUTPUT"'
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py: line 10: `print(">>>PYTHON-EXEC-OUTPUT")'
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Process.ChildProcess._handle.onexit (node:internal/child_process:302:5) {
killed: false,
code: 2,
signal: null,
cmd: '/bin/bash /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/interpreterInfo.py'
}
Starting Pylance language server.
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/printEnvVariables.py
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir . -s --cache-clear tests
cwd: .
[ERROR 2022-7-31 2:28:4.244]: Error discovering pytest tests:
n [Error]:
EnvironmentLocationNotFound: Not a conda environment: /anaconda/envs/ddm/envs/ddm
at ChildProcess.<anonymous> (/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.12.1/out/client/extension.js:2:238622)
at Object.onceWrapper (node:events:646:26)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Socket.<anonymous> (node:internal/child_process:451:11)
at Socket.emit (node:events:526:28)
at Pipe.<anonymous> (node:net:687:12)
Jupyter provided interpreter path override: /anaconda/envs/ddm/bin/pythonAdditional environment Info: Version: 1.71.0-insider
Commit: 7ed02a69658fc07f08740b98fa0d8d96c1a61ed4
Date: 2022-08-24T05:18:46.886Z (6 days ago)
Electron: 19.0.12
Chromium: 102.0.5005.167
Node.js: 16.14.2
V8: 10.2.154.15-electron.0
OS: Darwin x64 21.6.0
Sandboxed: YesNote that directly running the command Thanks in advance for help! |
|
Hey @akzaidi, can you help me with the information asked here #19421 (comment)? I suspect it's caused due to conda itself, and they made some recent fixes in their canary build, can you checkout the conda canary build and see if it helps? |
I'm having the same issue. Just tried this and had conda updated to This is a Macbook Pro M1 , VSCode version 1.70. |
❯ echo $ComSpec; echo $VIRTUAL_ENV; echo $CONDA_SHLVL
3Where did 3 come from? |
|
@karrtikr here's a screenshot of running I am seeing this exception after the tests: Traceback (most recent call last):
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py", line 26, in <module>
runpy.run_path(module, run_name="__main__")
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 263, in run_path
pkg_name=pkg_name, script_name=fname)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 96, in _run_module_code
mod_name, mod_spec, pkg_name, script_name)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 85, in _run_code
exec(code, run_globals)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py", line 22, in <module>
main(tool, cmd, subargs, toolargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/__main__.py", line 99, in main
parents, result = run(toolargs, **subargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/pytest/_discovery.py", line 44, in discover
raise Exception("pytest discovery failed (exit code {})".format(ec))
Exception: pytest discovery failed (exit code 2)
ERROR conda.cli.main_run:execute(49): `conda run python /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vThe same behavior occurs from running ❯ conda deactivate
alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.6 via 📐 v3.6.3
❯ conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir ~/bonsai/datadrivenmodel -s --cache-clear tests
>>>PYTHON-EXEC-OUTPUT
equivalent command: /anaconda/envs/ddm/bin/python -m pytest --collect-only --rootdir /home/alizaidi/bonsai/datadrivenmodel -s --cache-clear tests
============================= test session starts ==============================
platform linux -- Python 3.7.7, pytest-7.1.2, pluggy-0.13.1
rootdir: /home/alizaidi/bonsai/datadrivenmodel
plugins: anyio-3.4.0, clarity-1.0.1, hydra-core-1.0.5
collected 30 items / 1 error
<Package tests>
<Module test_dataclass.py>
<Function test_cartpole_at_st1>
<Function test_cartpole_at_st>
<Function test_diff_labels_1>
<Function test_diff_labels_2>
<Function test_concatenate_states_1>
<Function test_concatenate_states_2>
<Function test_concatenate_states_3>
<Module test_gboost.py>
<Function test_shape>
<Function test_lgm_train>
<Function test_xgb_train>
<Module test_gboost_diff.py>
<Function test_shape>
<Function test_lgm_train>
<Function test_xgb_train>
<Module test_loaders.py>
<Function test_cartpole_at_st1>
<Function test_cartpole_at_st>
<Function test_base_reader>
<Function test_diff_names>
<Module test_pytorch_model.py>
<Function test_shape>
<Function test_build>
<Function test_fit>
<Function test_sweep>
<Function test_predictor>
<Function test_save_model>
<Module test_sklearn.py>
<Function test_shape>
<Function test_svm_train>
<Function test_linear_train>
<Function test_gbr_train>
<Module test_sweeping.py>
<Function test_sweeping_lightgbm>
<Function test_sweeping_svr>
<Function test_sweeping_xgboost>
==================================== ERRORS ====================================
_________________ ERROR collecting tests/test_gboost_concat.py _________________
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/indexes/base.py:3361: in get_loc
return self._engine.get_loc(casted_key)
pandas/_libs/index.pyx:76: in pandas._libs.index.IndexEngine.get_loc
???
pandas/_libs/index.pyx:108: in pandas._libs.index.IndexEngine.get_loc
???
pandas/_libs/hashtable_class_helper.pxi:5198: in pandas._libs.hashtable.PyObjectHashTable.get_item
???
pandas/_libs/hashtable_class_helper.pxi:5206: in pandas._libs.hashtable.PyObjectHashTable.get_item
???
E KeyError: 'prev_state_x_position_1'
The above exception was the direct cause of the following exception:
tests/test_gboost_concat.py:17: in <module>
concatenated_zero_padding=True,
base.py:243: in load_csv
concatenate_var_length=concatenate_var_length,
dataclass.py:376: in load_csv
aux_df = self.df_concatenate_inputs(df)
dataclass.py:875: in df_concatenate_inputs
feat_array = df[feat].values
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/frame.py:3458: in __getitem__
indexer = self.columns.get_loc(key)
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/indexes/base.py:3363: in get_loc
raise KeyError(key) from err
E KeyError: 'prev_state_x_position_1'
=============================== warnings summary ===============================
../../../../anaconda/envs/ddm/lib/python3.7/site-packages/pkg_resources/__init__.py:1131
/anaconda/envs/ddm/lib/python3.7/site-packages/pkg_resources/__init__.py:1131: DeprecationWarning: Use of .. or absolute path in a resource path is not allowed and will raise exceptions in a future release.
self, resource_name
../../../../anaconda/envs/ddm/lib/python3.7/site-packages/mlflow/types/schema.py:49
/anaconda/envs/ddm/lib/python3.7/site-packages/mlflow/types/schema.py:49: DeprecationWarning: `np.object` is a deprecated alias for the builtin `object`. To silence this warning, use `object` by itself. Doing this will not modify any behavior and is safe.
Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
binary = (7, np.dtype("bytes"), "BinaryType", np.object)
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
ERROR tests/test_gboost_concat.py - KeyError: 'prev_state_x_position_1'
!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!
===================== 30 tests collected, 1 error in 3.34s =====================
<<<PYTHON-EXEC-OUTPUT
Traceback (most recent call last):
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py", line 26, in <module>
runpy.run_path(module, run_name="__main__")
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 263, in run_path
pkg_name=pkg_name, script_name=fname)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 96, in _run_module_code
mod_name, mod_spec, pkg_name, script_name)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 85, in _run_code
exec(code, run_globals)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py", line 22, in <module>
main(tool, cmd, subargs, toolargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/__main__.py", line 99, in main
parents, result = run(toolargs, **subargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/pytest/_discovery.py", line 44, in discover
raise Exception("pytest discovery failed (exit code {})".format(ec))
Exception: pytest discovery failed (exit code 2)
ERROR conda.cli.main_run:execute(49): `conda run python /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir /home/alizaidi/bonsai/datadrivenmodel -s --cache-clear tests` failed. (See above for error) |
hmm that is coming from |
Well that suggests that the conda environment has not been deactivated successfully, before running the I'm expecting to see the same error: Thanks for all the help! |
|
@akzaidi I tried with codespaces but I'm successfully able to discover the tests:
All I did was create 16 core machine, run: then created an
reload the window and tests were discovered. |
aha, I was also able to get tests discovered on codespaces when creating the Unfortunately, I'm still hitting the same error locally. I added the
|
Interesting, so it would seem the environment is already activated in the bash terminal (You've probably have set Note we're trying to replicate the same error in terminal under the same conditions, so that we can take the Python extension out of the picture and only focus on the command. Python extension internally simply launches the Please also send me your User settings. |
This comment was marked as off-topic.
This comment was marked as off-topic.
|
hmm, sometimes the env variable is set to 3 instead of 2... Not sure what to make of that. In a new terminal running alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.4 via 📐 v3.6.3
❯ conda activate ddm
alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.7 via 📐 v3.6.3 via 🅒 ddm
❯ echo $CONDA_SHLVL
3
alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.7 via 📐 v3.6.3 via 🅒 ddm
❯ conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir ~/bonsai/datadrivenmodel -s --cache-clear tests
>>>PYTHON-EXEC-OUTPUT
equivalent command: /anaconda/envs/ddm/bin/python -m pytest --collect-only --rootdir /home/alizaidi/bonsai/datadrivenmodel -s --cache-clear tests
============================= test session starts ==============================
platform linux -- Python 3.7.7, pytest-7.1.2, pluggy-1.0.0
rootdir: /home/alizaidi/bonsai/datadrivenmodel
plugins: anyio-3.4.0, clarity-1.0.1, hydra-core-1.0.5
collected 30 items / 1 error
<Package tests>
<Module test_dataclass.py>
<Function test_cartpole_at_st1>
<Function test_cartpole_at_st>
<Function test_diff_labels_1>
<Function test_diff_labels_2>
<Function test_concatenate_states_1>
<Function test_concatenate_states_2>
<Function test_concatenate_states_3>
<Module test_gboost.py>
<Function test_shape>
<Function test_lgm_train>
<Function test_xgb_train>
<Module test_gboost_diff.py>
<Function test_shape>
<Function test_lgm_train>
<Function test_xgb_train>
<Module test_loaders.py>
<Function test_cartpole_at_st1>
<Function test_cartpole_at_st>
<Function test_base_reader>
<Function test_diff_names>
<Module test_pytorch_model.py>
<Function test_shape>
<Function test_build>
<Function test_fit>
<Function test_sweep>
<Function test_predictor>
<Function test_save_model>
<Module test_sklearn.py>
<Function test_shape>
<Function test_svm_train>
<Function test_linear_train>
<Function test_gbr_train>
<Module test_sweeping.py>
<Function test_sweeping_lightgbm>
<Function test_sweeping_svr>
<Function test_sweeping_xgboost>
==================================== ERRORS ====================================
_________________ ERROR collecting tests/test_gboost_concat.py _________________
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/indexes/base.py:3361: in get_loc
return self._engine.get_loc(casted_key)
pandas/_libs/index.pyx:76: in pandas._libs.index.IndexEngine.get_loc
???
pandas/_libs/index.pyx:108: in pandas._libs.index.IndexEngine.get_loc
???
pandas/_libs/hashtable_class_helper.pxi:5198: in pandas._libs.hashtable.PyObjectHashTable.get_item
???
pandas/_libs/hashtable_class_helper.pxi:5206: in pandas._libs.hashtable.PyObjectHashTable.get_item
???
E KeyError: 'prev_state_x_position_1'
The above exception was the direct cause of the following exception:
tests/test_gboost_concat.py:17: in <module>
concatenated_zero_padding=True,
base.py:243: in load_csv
concatenate_var_length=concatenate_var_length,
dataclass.py:376: in load_csv
aux_df = self.df_concatenate_inputs(df)
dataclass.py:875: in df_concatenate_inputs
feat_array = df[feat].values
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/frame.py:3458: in __getitem__
indexer = self.columns.get_loc(key)
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/indexes/base.py:3363: in get_loc
raise KeyError(key) from err
E KeyError: 'prev_state_x_position_1'
=============================== warnings summary ===============================
../../../../anaconda/envs/ddm/lib/python3.7/site-packages/pkg_resources/__init__.py:1131
/anaconda/envs/ddm/lib/python3.7/site-packages/pkg_resources/__init__.py:1131: DeprecationWarning: Use of .. or absolute path in a resource path is not allowed and will raise exceptions in a future release.
self, resource_name
../../../../anaconda/envs/ddm/lib/python3.7/site-packages/mlflow/types/schema.py:49
/anaconda/envs/ddm/lib/python3.7/site-packages/mlflow/types/schema.py:49: DeprecationWarning: `np.object` is a deprecated alias for the builtin `object`. To silence this warning, use `object` by itself. Doing this will not modify any behavior and is safe.
Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
binary = (7, np.dtype("bytes"), "BinaryType", np.object)
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
ERROR tests/test_gboost_concat.py - KeyError: 'prev_state_x_position_1'
!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!
===================== 30 tests collected, 1 error in 3.32s =====================
<<<PYTHON-EXEC-OUTPUT
Traceback (most recent call last):
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py", line 26, in <module>
runpy.run_path(module, run_name="__main__")
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 263, in run_path
pkg_name=pkg_name, script_name=fname)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 96, in _run_module_code
mod_name, mod_spec, pkg_name, script_name)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 85, in _run_code
exec(code, run_globals)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py", line 22, in <module>
main(tool, cmd, subargs, toolargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/__main__.py", line 99, in main
parents, result = run(toolargs, **subargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/pytest/_discovery.py", line 44, in discover
raise Exception("pytest discovery failed (exit code {})".format(ec))
Exception: pytest discovery failed (exit code 2)
ERROR conda.cli.main_run:execute(49): `conda run python /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir /home/alizaidi/bonsai/datadrivenmodel -s --cache-clear tests` failed. (See above for error)
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"sync.autoUpload": true,
"sync.removeExtensions": false,
"sync.syncExtensions": true,
// "tabnine.experimentalAutoImports": true,
// "r.lsp.path": "/usr/local/bin/R",
"r.rterm.mac": "/Users/alizaidi-msft/miniconda3/bin/radian",
"r.rpath.mac": "/usr/local/bin/R",
"r.alwaysUseActiveTerminal": true,
"r.bracketedPaste": true,
"markdown-preview-enhanced.scrollSync": true,
"python.analysis.diagnosticMode": "workspace",
"python.showStartPage": false,
"python.dataScience.alwaysTrustNotebooks": true,
"python.languageServer": "Pylance",
"python.formatting.provider": "black",
"python.dataScience.askForKernelRestart": false,
"python.dataScience.sendSelectionToInteractiveWindow": true,
"gutterpreview.imagePreviewMaxHeight": 400,
"markdown-preview-enhanced.HTML5EmbedUseLinkSyntax": true,
"sync.quietSync": true,
"editor.formatOnSave": true,
"[jsonc]": {
"editor.defaultFormatter": "vscode.json-language-features"
},
"cSpell.userWords": [
"discretize",
"multimodality",
"quickstart"
],
"cSpell.enabled": true,
"python.analysis.typeCheckingMode": "basic",
"workbench.iconTheme": "material-icon-theme",
// "markdownlint.customRules": [
// "{docsmsft.docs-linting}/markdownlint-custom-rules/rules.js"
// ],
// "markdownlint.config": {
// "MD028": false
// },
"jupyter.alwaysTrustNotebooks": true,
"editor.accessibilitySupport": "off",
// "yaml.schemas": {
// "file:///toc.schema.json": "/toc\\.yml/i"
// },
"search.useIgnoreFiles": false,
"sync.forceUpload": true,
"jupyter.askForKernelRestart": false,
"sync.forceDownload": true,
"jupyter.insidersChannel": "off",
"terminal.integrated.commandsToSkipShell": [
"language-julia.interrupt"
],
// "workbench.colorTheme": "Pitch Black",
"workbench.startupEditor": "welcomePage",
"footsteps.doHighlightChanges": false,
"foam.graph.style": {
"fontSize": 11,
"lineColor": "#277da1",
"lineWidth": 0.2,
"particleWidth": 1.0,
"highlightedForeground": "#f9c74f",
"node": {
"note": "#277da1",
"placeholder": "#545454",
}
},
// "todo-tree.regex.regex": "(//|#|<!--|;|/\\*|^|^\\s*(-|\\d+.))\\s*($TAGS)",
"githubPullRequests.fileListLayout": "flat",
"jupyter.interactiveWindowMode": "perFile",
"ai.azureml.experimental: V2Config": true,
"jupyter.allowUnauthorizedRemoteConnection": true,
"security.workspace.trust.untrustedFiles": "open",
"editor.wordSeparators": "/\\()\"':,.;<>~!@#$%^&*|+=[]{}`?-",
"notebook.insertToolbarLocation": "betweenCells",
"notebook.showCellStatusBar": "hidden",
"redhat.telemetry.enabled": false,
"tabnine.receiveBetaChannelUpdates": true,
"editor.inlineSuggest.enabled": true,
"editor.tabCompletion": "on",
"github.copilot.enable": {
"*": true,
"yaml": true,
"plaintext": true,
"markdown": true,
"r": true,
},
"github.copilot.autocomplete.enable": true,
"github.copilot.advanced": {
"debug.autocomplete.showConfidence": true,
},
"julia.symbolCacheDownload": true,
"jupyter.sendSelectionToInteractiveWindow": true,
"jupyter.interactiveWindow.alwaysScrollOnNewCell": true,
"markdown.marp.enableHtml": true,
"jupyter.themeMatplotlibPlots": true,
"jupyter.showVariableViewWhenDebugging": true,
"jupyter.generateSVGPlots": true,
"r.plot.useHttpgd": true,
"editor.stickyScroll.enabled": true,
// "python.terminal.activateEnvironment": false
} |
|
Please don't activate the terminal using conda activate ddm before running the command. Make sure the setting python.terminal.activateEnvironment is set to false. |
|
Okay, I set it to false. Here is the output from running alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.4 via 📐 v3.6.3
❯ echo $CONDA_SHLVL
2
alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.4 via 📐 v3.6.3
❯
alizaidi in azdevrl in datadrivenmodel on alizaidi/lag_improvements [?] via 🐍 v3.7.4 via 📐 v3.6.3
❯ conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir ~/bonsai/datadrivenmodel -s --cache-clear tests
>>>PYTHON-EXEC-OUTPUT
equivalent command: /anaconda/envs/ddm/bin/python -m pytest --collect-only --rootdir /home/alizaidi/bonsai/datadrivenmodel -s --cache-clear tests
============================= test session starts ==============================
platform linux -- Python 3.7.7, pytest-7.1.2, pluggy-1.0.0
rootdir: /home/alizaidi/bonsai/datadrivenmodel
plugins: anyio-3.4.0, clarity-1.0.1, hydra-core-1.0.5
collected 30 items / 1 error
<Package tests>
<Module test_dataclass.py>
<Function test_cartpole_at_st1>
<Function test_cartpole_at_st>
<Function test_diff_labels_1>
<Function test_diff_labels_2>
<Function test_concatenate_states_1>
<Function test_concatenate_states_2>
<Function test_concatenate_states_3>
<Module test_gboost.py>
<Function test_shape>
<Function test_lgm_train>
<Function test_xgb_train>
<Module test_gboost_diff.py>
<Function test_shape>
<Function test_lgm_train>
<Function test_xgb_train>
<Module test_loaders.py>
<Function test_cartpole_at_st1>
<Function test_cartpole_at_st>
<Function test_base_reader>
<Function test_diff_names>
<Module test_pytorch_model.py>
<Function test_shape>
<Function test_build>
<Function test_fit>
<Function test_sweep>
<Function test_predictor>
<Function test_save_model>
<Module test_sklearn.py>
<Function test_shape>
<Function test_svm_train>
<Function test_linear_train>
<Function test_gbr_train>
<Module test_sweeping.py>
<Function test_sweeping_lightgbm>
<Function test_sweeping_svr>
<Function test_sweeping_xgboost>
==================================== ERRORS ====================================
_________________ ERROR collecting tests/test_gboost_concat.py _________________
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/indexes/base.py:3361: in get_loc
return self._engine.get_loc(casted_key)
pandas/_libs/index.pyx:76: in pandas._libs.index.IndexEngine.get_loc
???
pandas/_libs/index.pyx:108: in pandas._libs.index.IndexEngine.get_loc
???
pandas/_libs/hashtable_class_helper.pxi:5198: in pandas._libs.hashtable.PyObjectHashTable.get_item
???
pandas/_libs/hashtable_class_helper.pxi:5206: in pandas._libs.hashtable.PyObjectHashTable.get_item
???
E KeyError: 'prev_state_x_position_1'
The above exception was the direct cause of the following exception:
tests/test_gboost_concat.py:17: in <module>
concatenated_zero_padding=True,
base.py:243: in load_csv
concatenate_var_length=concatenate_var_length,
dataclass.py:376: in load_csv
aux_df = self.df_concatenate_inputs(df)
dataclass.py:875: in df_concatenate_inputs
feat_array = df[feat].values
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/frame.py:3458: in __getitem__
indexer = self.columns.get_loc(key)
/anaconda/envs/ddm/lib/python3.7/site-packages/pandas/core/indexes/base.py:3363: in get_loc
raise KeyError(key) from err
E KeyError: 'prev_state_x_position_1'
=============================== warnings summary ===============================
../../../../anaconda/envs/ddm/lib/python3.7/site-packages/pkg_resources/__init__.py:1131
/anaconda/envs/ddm/lib/python3.7/site-packages/pkg_resources/__init__.py:1131: DeprecationWarning: Use of .. or absolute path in a resource path is not allowed and will raise exceptions in a future release.
self, resource_name
../../../../anaconda/envs/ddm/lib/python3.7/site-packages/mlflow/types/schema.py:49
/anaconda/envs/ddm/lib/python3.7/site-packages/mlflow/types/schema.py:49: DeprecationWarning: `np.object` is a deprecated alias for the builtin `object`. To silence this warning, use `object` by itself. Doing this will not modify any behavior and is safe.
Deprecated in NumPy 1.20; for more details and guidance: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations
binary = (7, np.dtype("bytes"), "BinaryType", np.object)
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
ERROR tests/test_gboost_concat.py - KeyError: 'prev_state_x_position_1'
!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!
===================== 30 tests collected, 1 error in 3.38s =====================
<<<PYTHON-EXEC-OUTPUT
Traceback (most recent call last):
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py", line 26, in <module>
runpy.run_path(module, run_name="__main__")
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 263, in run_path
pkg_name=pkg_name, script_name=fname)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 96, in _run_module_code
mod_name, mod_spec, pkg_name, script_name)
File "/anaconda/envs/ddm/lib/python3.7/runpy.py", line 85, in _run_code
exec(code, run_globals)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py", line 22, in <module>
main(tool, cmd, subargs, toolargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/__main__.py", line 99, in main
parents, result = run(toolargs, **subargs)
File "/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/adapter/pytest/_discovery.py", line 44, in discover
raise Exception("pytest discovery failed (exit code {})".format(ec))
Exception: pytest discovery failed (exit code 2)
ERROR conda.cli.main_run:execute(49): `conda run python /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir /home/alizaidi/bonsai/datadrivenmodel -s --cache-clear tests` failed. (See above for error)
Unfortunately, the extension continues to fail at discovering tests: Experiment 'pythonaa' is active
Experiment 'pythonSurveyNotificationcf' is active
LSP Notebooks experiment is enabled
LSP Notebooks interactive window support is enabled
Python interpreter path: /anaconda/envs/ddm/bin/python
> conda info --json
> poetry env list --full-path
cwd: ~/courses/streamlit/streamlit-examples/streamlit_prophet
[ERROR 2022-8-6 23:42:15.805]: [Error: Command failed: poetry env list --full-path
/bin/sh: 1: poetry: not found
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Socket.<anonymous> (node:internal/child_process:451:11)
at Socket.emit (node:events:526:28)
at Pipe.<anonymous> (node:net:687:12)] {
killed: false,
code: 127,
signal: null,
cmd: 'poetry env list --full-path'
}
> /usr/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /usr/bin/python3 ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /usr/include/python3.6 ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /usr/include/python3.7 ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
[ERROR 2022-8-6 23:42:15.906]: [Error: Command failed: /usr/include/python3.6 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
/bin/sh: 1: /usr/include/python3.6: Permission denied
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Socket.<anonymous> (node:internal/child_process:451:11)
at Socket.emit (node:events:526:28)
at Pipe.<anonymous> (node:net:687:12)] {
killed: false,
code: 126,
signal: null,
cmd: '/usr/include/python3.6 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py'
}
[ERROR 2022-8-6 23:42:15.908]: [Error: Command failed: /usr/include/python3.7 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
/bin/sh: 1: /usr/include/python3.7: Permission denied
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Socket.<anonymous> (node:internal/child_process:451:11)
at Socket.emit (node:events:526:28)
at Pipe.<anonymous> (node:net:687:12)] {
killed: false,
code: 126,
signal: null,
cmd: '/usr/include/python3.7 /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py'
}
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/printEnvVariables.py
> /anaconda/envs/aisc/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/alae/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/archai/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/audio/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/audiotf2/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/azureml_py36_automl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/azureml_py36_pytorch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/azureml_py36_tensorflow/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai-batch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai-preview/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/bonsai-scg-latest/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/brain/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/cleanrl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/clip-dalle/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/clip-featureviz/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/coinbot/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/colab/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/d3rl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/dalle/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/data2sim/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/ddm/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/ddm3/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/dmcontrol/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/dvc/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/hfcourse/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/iglu/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/jpylb/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/jupy/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/mineiglurl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/minerl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/modelcard/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/nlu/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/parsing/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/py37_default/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/py37_pytorch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/py37_tensorflow/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/ray/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/repsol/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/rl/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/rlex/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/rlydoe/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/sbi/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/timeformers/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /anaconda/envs/torch/bin/python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
> /bin/bash ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
[ERROR 2022-8-6 23:42:31.569]: Error: Command failed: /bin/bash /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py: line 4: import: command not found
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py: line 5: import: command not found
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py: line 10: syntax error near unexpected token `">>>PYTHON-EXEC-OUTPUT"'
/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py: line 10: `print(">>>PYTHON-EXEC-OUTPUT")'
at ChildProcess.exithandler (node:child_process:399:12)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Process.ChildProcess._handle.onexit (node:internal/child_process:302:5) {
killed: false,
code: 2,
signal: null,
cmd: '/bin/bash /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py /home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/interpreterInfo.py'
}
Starting Pylance language server.
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/printEnvVariables.py
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir ~/bonsai/datadrivenmodel -s --cache-clear tests
cwd: ~/bonsai/datadrivenmodel
[ERROR 2022-8-6 23:43:3.162]: Error discovering pytest tests:
n [Error]:
EnvironmentLocationNotFound: Not a conda environment: /anaconda/envs/ddm/envs/ddm
at ChildProcess.<anonymous> (/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/out/client/extension.js:2:240364)
at Object.onceWrapper (node:events:646:26)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Process.ChildProcess._handle.onexit (node:internal/child_process:302:5)
Python interpreter path: /usr/bin/python3
Starting Pylance language server.
Python interpreter path: /anaconda/envs/ddm/bin/python
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/printEnvVariables.py
> conda run -n ddm --no-capture-output python ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/get_output_via_markers.py ~/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/pythonFiles/testing_tools/run_adapter.py discover pytest -- --rootdir ~/bonsai/datadrivenmodel -s --cache-clear tests
cwd: ~/bonsai/datadrivenmodel
[ERROR 2022-8-7 1:46:17.863]: Error discovering pytest tests:
n [Error]:
EnvironmentLocationNotFound: Not a conda environment: /anaconda/envs/ddm/envs/ddm
at ChildProcess.<anonymous> (/home/alizaidi/.vscode-server-insiders/extensions/ms-python.python-2022.14.0/out/client/extension.js:2:240364)
at Object.onceWrapper (node:events:646:26)
at ChildProcess.emit (node:events:526:28)
at maybeClose (node:internal/child_process:1092:16)
at Process.ChildProcess._handle.onexit (node:internal/child_process:302:5) |
|
Hey everyone, check #18493 (comment) out, let me know if you have the same issue. |
Hey @karrtikr , got some time to check this today. Can confirm having conda in the environment was causing the test discovery to fail. The environment which I was using had I tried install the latest |
|
@akzaidi Now that we can reproduce it, I'll open an issue on conda. And I'm pretty sure fixing that will also fix your issue. Btw, can you demonstrate to me that conda is not installed in your environment? |
|
@aaravind100 In order to open an issue on conda, can you help me with the following deets:
They're needed to file a bug report on conda :) |
This comment was marked as resolved.
This comment was marked as resolved.
This comment was marked as resolved.
This comment was marked as resolved.
Just updated to (dev162) pytest_explore ~> conda info
active environment : dev162
active env location : /home/aravia1/miniconda3/envs/dev162
shell level : 1
user config file : /home/aravia1/.condarc
populated config files : /home/aravia1/.condarc
conda version : 22.9.0
conda-build version : not installed
python version : 3.9.12.final.0
virtual packages : __cuda=11.6=0
__linux=5.15.57.1=0
__glibc=2.35=0
__unix=0=0
__archspec=1=x86_64
base environment : /home/aravia1/miniconda3 (writable)
conda av data dir : /home/aravia1/miniconda3/etc/conda
conda av metadata url : None
channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/aravia1/miniconda3/pkgs
/home/aravia1/.conda/pkgs
envs directories : /home/aravia1/miniconda3/envs
/home/aravia1/.conda/envs
platform : linux-64
user-agent : conda/22.9.0 requests/2.28.1 CPython/3.9.12 Linux/5.15.57.1-microsoft-standard-WSL2 ubuntu/22.04.1 glibc/2.35
UID:GID : 1000:1000
netrc file : None
offline mode : False(dev162) pytest_explore ~> conda config --show-sources
==> /home/aravia1/.condarc <==
auto_activate_base: False
ssl_verify: False(dev162) pytest_explore ~> conda list --show-channel-urls
# packages in environment at /home/aravia1/miniconda3/envs/dev162:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main conda-forge
absl-py 1.0.0 pypi_0 pypi
adal 1.2.7 pypi_0 pypi
adlfs 2021.8.2 pypi_0 pypi
aiobotocore 1.4.2 pypi_0 pypi
aiohttp 3.8.1 pypi_0 pypi
aioitertools 0.8.0 pypi_0 pypi
aiosignal 1.2.0 pypi_0 pypi
alembic 1.5.8 pypi_0 pypi
appdirs 1.4.4 pypi_0 pypi
argon2-cffi 21.3.0 pypi_0 pypi
argon2-cffi-bindings 21.2.0 pypi_0 pypi
asn1crypto 1.5.1 pypi_0 pypi
async-timeout 4.0.2 pypi_0 pypi
asynctest 0.13.0 pypi_0 pypi
attrs 21.4.0 pypi_0 pypi
azure-common 1.1.28 pypi_0 pypi
azure-core 1.22.1 pypi_0 pypi
azure-datalake-store 0.0.52 pypi_0 pypi
azure-identity 1.10.0 pypi_0 pypi
azure-keyvault-secrets 4.4.0 pypi_0 pypi
azure-storage-blob 12.11.0 pypi_0 pypi
backcall 0.2.0 pypi_0 pypi
beautifulsoup4 4.11.1 pypi_0 pypi
black 20.8b0 pypi_0 pypi
bleach 5.0.0 pypi_0 pypi
blosc 1.18.1 he1b5a44_0 conda-forge
bokeh 2.0.1 py37hc8dfbb8_0 conda-forge
boto3 1.17.106 pypi_0 pypi
botocore 1.20.106 pypi_0 pypi
bottleneck 1.3.2 py37h161383b_2 conda-forge
ca-certificates 2021.10.8 ha878542_0 conda-forge
cachetools 4.2.4 pypi_0 pypi
certifi 2021.10.8 py37h89c1867_2 conda-forge
cffi 1.12.3 py37h2e261b9_0 defaults
chardet 3.0.4 py37_1003 conda-forge
charset-normalizer 2.0.12 pypi_0 pypi
click 8.0.4 py37h89c1867_0 conda-forge
cloudpickle 2.0.0 pypi_0 pypi
conda 4.12.0 py37h89c1867_0 conda-forge
conda-package-handling 1.6.0 py37h7b6447c_0 defaults
cryptography 3.3.2 pypi_0 pypi
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
cython 0.29.28 pypi_0 pypi
cytoolz 0.10.1 py37h516909a_0 conda-forge
dask 2021.11.2 pyhd8ed1ab_0 conda-forge
dask-core 2021.11.2 pyhd8ed1ab_0 conda-forge
dask-glm 0.2.0 py_1 conda-forge
dask-ml 1.9.0 pyhd8ed1ab_0 conda-forge
dbus 1.13.6 hfdff14a_1 conda-forge
debugpy 1.6.0 pypi_0 pypi
decorator 5.1.1 pypi_0 pypi
deepdiff 5.8.0 pypi_0 pypi
defusedxml 0.7.1 pypi_0 pypi
deprecated 1.2.13 pypi_0 pypi
distributed 2021.11.2 py37h89c1867_0 conda-forge
docstring-parser 0.14.1 pypi_0 pypi
entrypoints 0.4 pypi_0 pypi
et-xmlfile 1.1.0 pypi_0 pypi
expat 2.2.9 he1b5a44_2 conda-forge
fastapi 0.67.0 pypi_0 pypi
fastjsonschema 2.15.3 pypi_0 pypi
fire 0.4.0 pypi_0 pypi
flake8 4.0.1 pypi_0 pypi
flatbuffers 2.0 pypi_0 pypi
fontconfig 2.13.1 he4413a7_1000 conda-forge
freetype 2.10.1 he06d7ca_0 conda-forge
frozenlist 1.3.0 pypi_0 pypi
fsspec 2021.8.1 pypi_0 pypi
future 0.18.2 pypi_0 pypi
gcsfs 2021.8.1 pypi_0 pypi
geos 3.8.1 he1b5a44_0 conda-forge
gettext 0.19.8.1 hf34092f_1004 conda-forge
gitdb 4.0.9 pypi_0 pypi
gitpython 3.1.27 pypi_0 pypi
glib 2.66.3 h58526e2_0 conda-forge
google-api-core 2.7.3 pypi_0 pypi
google-api-python-client 1.12.11 pypi_0 pypi
google-auth 1.35.0 pypi_0 pypi
google-auth-httplib2 0.1.0 pypi_0 pypi
google-auth-oauthlib 0.5.1 pypi_0 pypi
google-cloud-core 2.3.0 pypi_0 pypi
google-cloud-storage 1.44.0 pypi_0 pypi
google-crc32c 1.3.0 pypi_0 pypi
google-resumable-media 2.3.2 pypi_0 pypi
googleapis-common-protos 1.56.0 pypi_0 pypi
greenlet 1.1.2 pypi_0 pypi
grpcio 1.41.1 pypi_0 pypi
grpcio-tools 1.41.1 pypi_0 pypi
gst-plugins-base 1.14.5 h0935bb2_2 conda-forge
gstreamer 1.14.5 h36ae1b5_2 conda-forge
heapdict 1.0.1 py_0 conda-forge
httplib2 0.20.4 pypi_0 pypi
humanfriendly 8.2 pypi_0 pypi
icu 58.2 hf484d3e_1000 conda-forge
idna 2.8 py37_0 defaults
imbalanced-learn 0.9.0 pypi_0 pypi
imblearn 0.0 pypi_0 pypi
importlib-metadata 4.2.0 pypi_0 pypi
importlib-resources 5.7.1 pypi_0 pypi
inflection 0.5.1 pypi_0 pypi
iniconfig 1.1.1 pypi_0 pypi
ipykernel 6.13.0 pypi_0 pypi
ipython 7.33.0 pypi_0 pypi
ipython-genutils 0.2.0 pypi_0 pypi
isodate 0.6.1 pypi_0 pypi
jedi 0.18.1 pypi_0 pypi
jinja2 3.0.3 pypi_0 pypi
jmespath 0.10.0 pypi_0 pypi
joblib 1.1.0 pyhd8ed1ab_0 conda-forge
jpeg 9c h14c3975_1001 conda-forge
jsonschema 3.2.0 pypi_0 pypi
jupyter-client 7.3.0 pypi_0 pypi
jupyter-core 4.10.0 pypi_0 pypi
jupyterlab-pygments 0.2.2 pypi_0 pypi
kfp 1.8.12 pypi_0 pypi
kfp-pipeline-spec 0.1.14 pypi_0 pypi
kfp-server-api 1.8.1 pypi_0 pypi
kiwisolver 1.3.1 py37hc928c03_0 conda-forge
kneed 0.7.0 pypi_0 pypi
kubernetes 12.0.1 pypi_0 pypi
libblas 3.8.0 14_openblas conda-forge
libcblas 3.8.0 14_openblas conda-forge
libedit 3.1.20181209 hc058e9b_0 defaults
libffi 3.2.1 hd88cf55_4 defaults
libgcc-ng 9.1.0 hdf63c60_0 defaults
libgfortran-ng 7.3.0 hdf63c60_5 conda-forge
libglib 2.66.3 hbe7bbb4_0 conda-forge
libiconv 1.16 h516909a_0 conda-forge
liblapack 3.8.0 14_openblas conda-forge
libllvm10 10.0.1 he513fc3_3 conda-forge
libopenblas 0.3.7 h5ec1e0e_6 conda-forge
libpng 1.6.37 hed695b0_1 conda-forge
libstdcxx-ng 9.1.0 hdf63c60_0 defaults
libtiff 4.0.9 h648cc4a_1002 conda-forge
libuuid 2.32.1 h14c3975_1000 conda-forge
libxcb 1.13 h14c3975_1002 conda-forge
libxml2 2.9.9 h13577e0_2 conda-forge
lightgbm 3.3.2 pypi_0 pypi
llvmlite 0.34.0 py37h5202443_2 conda-forge
locket 0.2.0 py_2 conda-forge
lz4 3.0.2 py37h5a7ed16_2 conda-forge
lz4-c 1.9.2 he1b5a44_0 conda-forge
mako 1.2.0 pypi_0 pypi
markupsafe 2.1.1 pypi_0 pypi
matplotlib 3.2.1 0 conda-forge
matplotlib-base 3.2.1 py37hef1b27d_0 defaults
matplotlib-inline 0.1.3 pypi_0 pypi
mccabe 0.6.1 pypi_0 pypi
mergedeep 1.3.4 pypi_0 pypi
mistune 0.8.4 pypi_0 pypi
mlrun 1.0.0 pypi_0 pypi
msal 1.17.0 pypi_0 pypi
msal-extensions 1.0.0 pypi_0 pypi
msgpack-python 1.0.0 py37h99015e2_1 conda-forge
msrest 0.6.21 pypi_0 pypi
multidict 6.0.2 pypi_0 pypi
multipledispatch 0.6.0 py_0 conda-forge
mypy-extensions 0.4.3 pypi_0 pypi
nbclient 0.6.2 pypi_0 pypi
nbconvert 6.5.0 pypi_0 pypi
nbformat 5.4.0 pypi_0 pypi
ncurses 6.1 he6710b0_1 defaults
nest-asyncio 1.5.5 pypi_0 pypi
nomkl 1.0 h5ca1d4c_0 conda-forge
notebook 6.4.11 pypi_0 pypi
nuclio-jupyter 0.9.1 pypi_0 pypi
nuclio-sdk 0.4.0 pypi_0 pypi
numba 0.51.2 py37h9fdb41a_0 conda-forge
numexpr 2.7.1 py37h9fdb41a_3 conda-forge
numpy 1.21.6 pypi_0 pypi
oauthlib 3.2.0 pypi_0 pypi
olefile 0.46 py_0 conda-forge
onnx 1.11.0 pypi_0 pypi
onnxconverter-common 1.9.0 pypi_0 pypi
onnxmltools 1.11.0 pypi_0 pypi
onnxruntime 1.11.1 pypi_0 pypi
openpyxl 3.0.9 pypi_0 pypi
openssl 1.1.1h h516909a_0 conda-forge
ordered-set 4.1.0 pypi_0 pypi
orjson 3.6.8 pypi_0 pypi
ortools 9.3.10497 pypi_0 pypi
oscrypto 1.3.0 pypi_0 pypi
packaging 21.3 pyhd8ed1ab_0 conda-forge
pandas 1.3.5 pypi_0 pypi
pandasql 0.7.3 pypi_0 pypi
pandocfilters 1.5.0 pypi_0 pypi
parso 0.8.3 pypi_0 pypi
partd 1.1.0 py_0 conda-forge
pathspec 0.9.0 pypi_0 pypi
patsy 0.5.2 pyhd8ed1ab_0 conda-forge
pcre 8.44 he1b5a44_0 conda-forge
pexpect 4.8.0 pypi_0 pypi
pickleshare 0.7.5 pypi_0 pypi
pillow 5.3.0 py37h00a061d_1000 conda-forge
pip 22.2.2 pypi_0 pypi
plotly 5.7.0 pypi_0 pypi
pluggy 1.0.0 pypi_0 pypi
pmdarima 1.8.5 pypi_0 pypi
portalocker 2.4.0 pypi_0 pypi
prometheus-client 0.14.1 pypi_0 pypi
prompt-toolkit 3.0.29 pypi_0 pypi
protobuf 3.20.1 pypi_0 pypi
psutil 5.7.0 py37h8f50634_1 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
ptyprocess 0.7.0 pypi_0 pypi
py 1.11.0 pypi_0 pypi
pyarrow 5.0.0 pypi_0 pypi
pyasn1 0.4.8 pypi_0 pypi
pyasn1-modules 0.2.8 pypi_0 pypi
pycodestyle 2.8.0 pypi_0 pypi
pycosat 0.6.3 py37h14c3975_0 defaults
pycparser 2.19 py37_0 defaults
pycryptodomex 3.15.0 pypi_0 pypi
pydantic 1.9.0 pypi_0 pypi
pyflakes 2.4.0 pypi_0 pypi
pygments 2.12.0 pypi_0 pypi
pyjwt 2.3.0 pypi_0 pypi
pymysql 1.0.2 pypi_0 pypi
pyodbc 4.0.30 py37he1b5a44_0 conda-forge
pyopenssl 19.0.0 py37_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
pyqt 5.9.2 py37hcca6a23_4 conda-forge
pyrsistent 0.18.1 pypi_0 pypi
pysocks 1.7.1 py37_0 conda-forge
pytest 7.1.2 pypi_0 pypi
python 3.7.4 h265db76_1 defaults
python-blosc 1.9.1 py37h0da4684_0 conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-dotenv 0.17.1 pypi_0 pypi
python-editor 1.0.4 pypi_0 pypi
python-snappy 0.5.4 py37h484ad9e_3 conda-forge
python_abi 3.7 1_cp37m conda-forge
pytz 2019.3 py_0 conda-forge
pyyaml 5.4.1 pypi_0 pypi
pyzmq 22.3.0 pypi_0 pypi
qt 5.9.7 h52cfd70_2 conda-forge
readline 7.0 h7b6447c_5 defaults
regex 2022.4.24 pypi_0 pypi
requests 2.22.0 py37_0 conda-forge
requests-oauthlib 1.3.1 pypi_0 pypi
requests-toolbelt 0.9.1 pypi_0 pypi
rsa 4.8 pypi_0 pypi
ruamel_yaml 0.15.46 py37h14c3975_0 defaults
s3fs 2021.8.1 pypi_0 pypi
s3transfer 0.4.2 pypi_0 pypi
scikit-learn 1.0.2 pypi_0 pypi
scikit-plot 0.3.7 pypi_0 pypi
scipy 1.5.2 py37hb14ef9d_0 conda-forge
seaborn 0.11.2 pypi_0 pypi
semver 2.13.0 pypi_0 pypi
send2trash 1.8.0 pypi_0 pypi
setuptools 41.4.0 py37_0 conda-forge
shap 0.40.0 pypi_0 pypi
shapely 1.7.1 py37hd5b9dd9_1 conda-forge
sip 4.19.8 py37hf484d3e_1000 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
skl2onnx 1.11.1 pypi_0 pypi
slicer 0.0.7 pypi_0 pypi
smmap 5.0.0 pypi_0 pypi
snappy 1.1.8 he1b5a44_3 conda-forge
snowflake-connector-python 2.6.2 pypi_0 pypi
snowflake-sqlalchemy 1.3.3 pypi_0 pypi
sortedcontainers 2.1.0 py_0 conda-forge
soupsieve 2.3.2.post1 pypi_0 pypi
sqlalchemy 1.4.36 pypi_0 pypi
sqlite 3.30.0 h7b6447c_0 defaults
starlette 0.14.2 pypi_0 pypi
statsmodels 0.12.1 py37ha21ca33_1 conda-forge
storey 1.0.4 pypi_0 pypi
strip-hints 0.1.10 pypi_0 pypi
stumpy 1.10.2 pypi_0 pypi
tabulate 0.8.9 pypi_0 pypi
tblib 1.6.0 py_0 conda-forge
tenacity 8.0.1 pypi_0 pypi
termcolor 1.1.0 pypi_0 pypi
terminado 0.13.3 pypi_0 pypi
threadpoolctl 3.1.0 pyh8a188c0_0 conda-forge
tini 0.18.0 h14c3975_1001 conda-forge
tinycss2 1.1.1 pypi_0 pypi
tk 8.6.8 hbc83047_0 defaults
toml 0.10.2 pypi_0 pypi
tomli 2.0.1 pypi_0 pypi
toolz 0.10.0 py_0 conda-forge
tornado 6.1 py37h4abf009_0 conda-forge
tqdm 4.36.1 py_0 conda-forge
traitlets 5.1.1 pypi_0 pypi
typed-ast 1.5.3 pypi_0 pypi
typer 0.4.1 pypi_0 pypi
typing-extensions 3.10.0.2 pypi_0 pypi
ujson 5.2.0 pypi_0 pypi
unixodbc 2.3.7 hd1b7508_1000 conda-forge
uritemplate 3.0.1 pypi_0 pypi
urllib3 1.25.11 pypi_0 pypi
v3io 0.5.15 pypi_0 pypi
v3io-frames 0.10.2 pypi_0 pypi
v3iofs 0.1.10 pypi_0 pypi
wcwidth 0.2.5 pypi_0 pypi
webencodings 0.5.1 pypi_0 pypi
websocket-client 1.3.2 pypi_0 pypi
wheel 0.33.6 py37_0 conda-forge
wrapt 1.14.1 pypi_0 pypi
xgboost 1.6.0 pypi_0 pypi
xorg-libxau 1.0.9 h14c3975_0 conda-forge
xorg-libxdmcp 1.1.3 h516909a_0 conda-forge
xz 5.2.4 h14c3975_4 defaults
yaml 0.1.7 had09818_2 defaults
yarl 1.7.2 pypi_0 pypi
zict 2.0.0 py_0 conda-forge
zipp 3.8.0 pypi_0 pypi
zlib 1.2.11 h7b6447c_3 defaults |
|
Also found this weird path resolution problem :D when environment is active: (dev162) pytest_explore ~> which conda
/home/aravia1/miniconda3/envs/dev162/bin/conda
(dev162) pytest_explore ~> conda --version
conda 22.9.0
(dev162) pytest_explore ~> ~/miniconda3/envs/dev162/bin/conda --version
conda 4.12.0when no environment is active: pytest_explore ~> which conda
/home/aravia1/miniconda3/condabin/conda
pytest_explore ~> conda --version
conda 22.9.0
pytest_explore ~> ~/miniconda3/condabin/conda --version
conda 22.9.0 |
|
Created a bug on conda: conda/conda#12082, feel free to upvote that to raise priority. Closing in favor of conda. |
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Issue Type: Bug
Pytest discover tests
I get error:
EnvironmentLocationNotFound: Not a conda environment: C:\Conda\envs\swp10\envs\swp10
because the true path is just;
C:\Conda\envs\swp10\
Steps to reproduce:
Diagnostic data
python.languageServersetting: PylancelanguageServer: "Pylance"
linting
• enabled: true
• cwd: ""
• Flake8Args: ""
• flake8Enabled: false
• flake8Path: ""
• lintOnSave: true
• banditArgs: ""
• banditEnabled: false
• banditPath: ""
• mypyArgs: ""
• mypyEnabled: false
• mypyPath: ""
• pycodestyleArgs: ""
• pycodestyleEnabled: false
• pycodestylePath: ""
• prospectorArgs: ""
• prospectorEnabled: false
• prospectorPath: ""
• pydocstyleArgs: ""
• pydocstyleEnabled: false
• pylamaEnabled: false
formatting
• provider: "yapf"
testing
• cwd: ""
• debugPort: 3000
• nosetestArgs: ""
• nosetestsEnabled: undefined
• nosetestPath: ""
• promptToConfigure: true
• pytestArgs: ""
• pytestEnabled: true
• pytestPath: ""
• unittestArgs: ""
• unittestEnabled: false
• autoTestDiscoverOnSaveEnabled: true
terminal
• activateEnvironment: true
experiments
• enabled: true
• optInto: []
• optOutFrom: []
vsliv368cf:30146710
vsreu685:30147344
python383:30185418
vspor879:30202332
vspor708:30202333
vspor363:30204092
pythonvspyl392:30443607
pythontb:30283811
pythonptprofiler:30281270
vshan820:30294714
vstes263:30335439
pythondataviewer:30285071
vscod805cf:30301675
pythonvspyt200:30340761
binariesv615:30325510
bridge0708:30335490
bridge0723:30353136
vsaa593cf:30376535
vsc1dst:30438360
pythonvs932:30410667
wslgetstarted:30449410
pythonvsnew555:30457759
vscscmwlcmt:30465135
cppdebug:30475216
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