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Set attributes for SIR values with their interpretation history #170

Description

@msberends

After discussing in #168,

  • Have each SIR value contain attributes about its interpretation from MIC/disk rules

    With at least:

    • About the clinical breakpoints used
      • Guideline name and year
      • Reference table name
      • Breakpoint used
      • Additional dependencies on rules, such as UTI or non-UTI
    • Original breakpoint* Metadata
      • MIC or disk as source
      • Date/time + timezone

Then,

  • Update sir S3 methods to retain these attributes on data transformations

Afterwards,

  • Update antibiogram() to be able to work with this
  • Create functions to retrieve these data, also on data set level (e.g., recreate the output now available in sir_interpretation_history()

Activity

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