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1. CODEX CODEX Public

   Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation

   Java 47 12

2. CODEXServer CODEXServer Public

   Run CODEX apps on the web: driftcompensation, deconvolution, segmentation, clustering and viewing

   Java

3. CODEXServerSparkBuild CODEXServerSparkBuild Public

   Project to deploy the CODEX server on the left and right computers in the nolan lab.

   Java

4. scaffold scaffold Public

   scaffold

   R 18 8

5. vortex vortex Public

   VorteX Clustering Environment - Java graphical tool for single-cell analysis, clustering and visualization. Latest release:

   Java 34 6

6. CODEXViewer CODEXViewer Public

   An ImageJ plugin to view and analyze CODEX images from the CODEXToolkit.

   Java 1