Repositories list

• OAPT

  Public
  This is the description and implementation of the Ontology Analysis and Partitioning Tool (OAPT), which is developed and implemented within the AquaDiva project…

  Java

  •

  Apache License 2.0

  •11 fork•33 stars•00 issues•22 pull requests•Updated Apr 15, 2026Apr 15, 2026

• GerPS-Process

  Public
  Documents (modeling and evaluation) related to the GerPS-onto (An ontology for German public service processes) together with the code for its automatic populat…

  Creative Commons Attribution 4.0 International

  •11 fork•44 stars•00 issues•00 pull requests•Updated Mar 18, 2026Mar 18, 2026

• GerPS-Datafield

  Public
  Repository for the GerPS-DatafieldOntology and its dataset for test purpose.

  Creative Commons Attribution 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 12, 2026Mar 12, 2026

• KG-for-Biodiversity-Exploratories-Metadata

  Public
  TriG dumps + R2RML mappings for the BE Semantic Units KG (publications, datasets, links)

  knowledge-graphr2rmlbiodiversity+ 2

  knowledge-graphr2rmlbiodiversitykgsemantic-units

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 2, 2026Mar 2, 2026

• fairjupyter

  Public
  FAIR Jupyter: a knowledge graph for semantic sharing and granular exploration of a computational notebook reproducibility dataset.

  pythonjupyter-notebookontology+ 4

  pythonjupyter-notebookontologypubmed-centralknowledge-graphreproducibilityfair-data

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •11 fork•22 stars•00 issues•11 pull request•Updated Feb 26, 2026Feb 26, 2026

• abecto-space-travel-comparison

  Public
  This is a project to compare space travel data from Wikidata and DBpedia using ABECTO.

  Apache License 2.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jan 8, 2026Jan 8, 2026

• abecto-unit-ontology-comparison

  Public
  A comparison and evaluation of unit ontologies using the ABECTO.

  evaluationunits-of-measurecomparison+ 5

  evaluationunits-of-measurecomparisonknowledge-graphontologiesunits-of-measurementaboxunit-ontologies

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 4, 2026Jan 4, 2026

• abecto

  Public
  An ABox Evaluation and Comparison Tool for Ontologies.

  rdfevaluationowl+ 5

  rdfevaluationowlcomparisonknowledge-graphontologiesowl2abox

  Java

  •

  Apache License 2.0

  •00 forks•44 stars•55 issues•00 pull requests•Updated Jan 3, 2026Jan 3, 2026

• linted-data

  Public archive
  Java

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•11 pull request•Updated Dec 19, 2025Dec 19, 2025

• ontology-docs-deployer

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 26, 2025Nov 26, 2025

• abecto-ci-demo-example

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Nov 19, 2025Nov 19, 2025

• JaroWinklerSimilarityEvaluation

  Public
  Material for a comparison of Jaro-Winkler similarity computation approaches containing measurement source code, measurement execution scripts, measurement data,…

  TeX

  •

  Other

  •00 forks•00 stars•00 issues•11 pull request•Updated Jul 12, 2025Jul 12, 2025

• CoMerger

  Public
  Holistic Multiple Ontologies Merge

  Java

  •

  Apache License 2.0

  •00 forks•44 stars•44 issues•22 pull requests•Updated Jul 12, 2025Jul 12, 2025

• rdf-property-and-datatype-usage-scanner

  Public
  A tool to survey the usage of properties and datatypes in RDF dataset files (as the Web Data Commons) on the web.

  Java

  •

  MIT License

  •00 forks•00 stars•00 issues•11 pull request•Updated Jul 12, 2025Jul 12, 2025

• GerPS-Law

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 3, 2025Jul 3, 2025

• ReproduceMeON

  Public
  ReproduceMe Ontology Network (ReproduceMeON)

  experimentmachine-learningontology+ 2

  experimentmachine-learningontologyontologynetworkreproduceme

  Jupyter Notebook

  •11 fork•33 stars•00 issues•00 pull requests•Updated Jun 11, 2025Jun 11, 2025

• information-retrieval-using-multiple-LLM-and-RAG

  Public
  Information Retrieval using Multiple LLMs and RAG

  information-retrievalbiodiversityensemble-classifier+ 2

  information-retrievalbiodiversityensemble-classifierlarge-language-modelsretrieval-augmented-generation

  TeX

  •

  Apache License 2.0

  •11 fork•44 stars•00 issues•00 pull requests•Updated May 8, 2025May 8, 2025

• automatic-KG-creation-with-LLM

  Public
  Automatic Ontology and Knowledge Graph construction with LLM

  knowledge-graphreproducibilityontology-engineering+ 1

  knowledge-graphreproducibilityontology-engineeringlarge-language-models

  Python

  •

  Apache License 2.0

  •4343 forks•336336 stars•11 issue•99 pull requests•Updated Apr 24, 2025Apr 24, 2025

• GerPS-Software

  Public
  Creative Commons Attribution 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 9, 2025Apr 9, 2025

• PlantHub-QueryBuilder

  Public
  Creative Commons Attribution 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 26, 2025Feb 26, 2025

• INBIO

  Public
  This repository is used to keep track of the development process of INBIO as well as the outcome of the development process

  HTML

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 13, 2025Feb 13, 2025

• gerps-onto-landingpage

  Public
  Human-readable landingpage for our gerps ontologies.

  CSS

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jan 21, 2025Jan 21, 2025

• Reproduce-DLmethods-Biodiv

  Public
  This Repo contains the data and codes that were used to extract and analyse the reproducibility information of Deel Learning methods from publications in the Bi…

  Python

  •

  Apache License 2.0

  •22 forks•55 stars•00 issues•00 pull requests•Updated Jan 6, 2025Jan 6, 2025

• MLProvCodeGen

  Public
  Provenance-based Custom Code Generation of Machine Learning Experiments in Jupyter Notebooks

  machine-learningprovenancejinja2-templates+ 1

  machine-learningprovenancejinja2-templatesjupyterlab-extension

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks•55 stars•00 issues•2020 pull requests•Updated Dec 10, 2024Dec 10, 2024

• DaiSi

  Public
  [Dai:Si] is a framework for dataset search with a middleware (NodeJS) and a frontend (Angular). Easy to adjust for your own search index.

  demoangularnode+ 2

  demoangularnodefrontenddataset-search

  TypeScript

  •

  GNU Lesser General Public License v3.0

  •33 forks•11 star•00 issues•3636 pull requests•Updated Dec 5, 2024Dec 5, 2024

• computational-reproducibility-pmc

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •11 fork•1111 stars•00 issues•2525 pull requests•Updated Nov 22, 2024Nov 22, 2024

• iKNOW_poster

  Public
  A Knowledge Graph Management Platform for the Biodiversity Domain

  Ruby

  •

  MIT License

  •11 fork•00 stars•00 issues•22 pull requests•Updated Oct 28, 2024Oct 28, 2024

• XSearchKG

  Public
  Source code for XSearchKG, a full-stack web application for explainable keyword search over knowledge graphs

  knowledge-graphkeyword-searchexplainability

  knowledge-graphkeyword-searchexplainability

  JavaScript

  •

  MIT License

  •00 forks•22 stars•00 issues•1111 pull requests•Updated Oct 26, 2024Oct 26, 2024

• abecto-vocabulary

  Public
  The ABECTO Vocabulary (AV) is a vocabulary for the description of execution plans and results of the ABox Evaluation and Comparison Tool for Ontologies (ABECTO)…

  qualityrdfevaluation+ 4

  qualityrdfevaluationvocabularyowlontologyowl2

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 4, 2024Oct 4, 2024

• semantic-search-usability-analysis

  Public
  Supplementary material for a usability evaluation of a semantic search for biological datasets

  evaluationjupyter-notebookuser-interface+ 6

  evaluationjupyter-notebookuser-interfacebiodiversitysemantic-searchlife-sciencesuser-studyenvironmental-sciencedataset-search

  Jupyter Notebook

  •

  GNU Lesser General Public License v2.1

  •00 forks•22 stars•00 issues•00 pull requests•Updated Sep 18, 2024Sep 18, 2024