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SQL: don't reflect full database GH7396 #7581

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44 changes: 26 additions & 18 deletions pandas/io/sql.py
Original file line number Diff line number Diff line change
Expand Up @@ -76,6 +76,17 @@ def _parse_date_columns(data_frame, parse_dates):
return data_frame


def _is_sqlalchemy_engine(con):
try:
import sqlalchemy
if isinstance(con, sqlalchemy.engine.Engine):
return True
else:
return False
except ImportError:
return False


def execute(sql, con, cur=None, params=None):
"""
Execute the given SQL query using the provided connection object.
Expand Down Expand Up @@ -262,7 +273,15 @@ def read_sql_table(table_name, con, index_col=None, coerce_float=True,


"""
pandas_sql = PandasSQLAlchemy(con)
import sqlalchemy
from sqlalchemy.schema import MetaData
meta = MetaData(con)
try:
meta.reflect(only=[table_name])
except sqlalchemy.exc.InvalidRequestError:
raise ValueError("Table %s not found" % table_name)

pandas_sql = PandasSQLAlchemy(con, meta=meta)
table = pandas_sql.read_table(
table_name, index_col=index_col, coerce_float=coerce_float,
parse_dates=parse_dates, columns=columns)
Expand Down Expand Up @@ -380,6 +399,7 @@ def read_sql(sql, con, index_col=None, coerce_float=True, params=None,
coerce_float=coerce_float, parse_dates=parse_dates)

if pandas_sql.has_table(sql):
pandas_sql.meta.reflect(only=[sql])
return pandas_sql.read_table(
sql, index_col=index_col, coerce_float=coerce_float,
parse_dates=parse_dates, columns=columns)
Expand Down Expand Up @@ -471,17 +491,9 @@ def pandasSQL_builder(con, flavor=None, meta=None, is_cursor=False):
"""
# When support for DBAPI connections is removed,
# is_cursor should not be necessary.
try:
import sqlalchemy

if isinstance(con, sqlalchemy.engine.Engine):
return PandasSQLAlchemy(con, meta=meta)
else:
if flavor == 'mysql':
warnings.warn(_MYSQL_WARNING, FutureWarning)
return PandasSQLLegacy(con, flavor, is_cursor=is_cursor)

except ImportError:
if _is_sqlalchemy_engine(con):
return PandasSQLAlchemy(con, meta=meta)
else:
if flavor == 'mysql':
warnings.warn(_MYSQL_WARNING, FutureWarning)
return PandasSQLLegacy(con, flavor, is_cursor=is_cursor)
Expand Down Expand Up @@ -767,7 +779,6 @@ def __init__(self, engine, meta=None):
if not meta:
from sqlalchemy.schema import MetaData
meta = MetaData(self.engine)
meta.reflect(self.engine)

self.meta = meta

Expand Down Expand Up @@ -812,19 +823,16 @@ def tables(self):
return self.meta.tables

def has_table(self, name):
if self.meta.tables.get(name) is not None:
return True
else:
return False
return self.engine.has_table(name)

def get_table(self, table_name):
return self.meta.tables.get(table_name)

def drop_table(self, table_name):
if self.engine.has_table(table_name):
self.meta.reflect(only=[table_name])
self.get_table(table_name).drop()
self.meta.clear()
self.meta.reflect()

def _create_sql_schema(self, frame, table_name):
table = PandasSQLTable(table_name, self, frame=frame)
Expand Down
18 changes: 18 additions & 0 deletions pandas/io/tests/test_sql.py
Original file line number Diff line number Diff line change
Expand Up @@ -623,6 +623,22 @@ def test_read_sql_delegate(self):
iris_frame2 = sql.read_sql('iris', self.conn)
tm.assert_frame_equal(iris_frame1, iris_frame2)

def test_not_reflect_all_tables(self):
# create invalid table
qry = """CREATE TABLE invalid (x INTEGER, y UNKNOWN);"""
self.conn.execute(qry)
qry = """CREATE TABLE other_table (x INTEGER, y INTEGER);"""
self.conn.execute(qry)

with warnings.catch_warnings(record=True) as w:
# Cause all warnings to always be triggered.
warnings.simplefilter("always")
# Trigger a warning.
sql.read_sql_table('other_table', self.conn)
sql.read_sql_query('SELECT * FROM other_table', self.conn)
# Verify some things
self.assertEqual(len(w), 0, "Warning triggered for other table")


class TestSQLLegacyApi(_TestSQLApi):
"""
Expand Down Expand Up @@ -736,6 +752,8 @@ def setup_connect(self):
try:
self.conn = self.connect()
self.pandasSQL = sql.PandasSQLAlchemy(self.conn)
# to test if connection can be made:
self.conn.connect()
except sqlalchemy.exc.OperationalError:
raise nose.SkipTest("Can't connect to {0} server".format(self.flavor))

Expand Down