Dirichlet multinomial (continued)#4373

Merged

AlexAndorra merged 57 commits intopymc-devs:masterfrom

ricardoV94:dirichlet_multinomial_fork

Jan 16, 2021

Commits on Jan 4, 2021

Add implementation of DM distribution.

bsmith89
authored and
ricardoV94
committed
Fix class name mistake.

bsmith89
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ricardoV94
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Add DM dist to exported multivariate distributions.

bsmith89
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ricardoV94
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Export DirichletMultinomial in pymc3.distributions

bsmith89
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ricardoV94
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Attempt at matching Multinomial initialization.

bsmith89
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ricardoV94
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Add some simple tests for DM.

bsmith89
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ricardoV94
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Correctly deal with 1d n and 2d alpha.

bsmith89
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ricardoV94
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Fix typo in DM random.

bsmith89
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ricardoV94
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Fix faulty tests for DM.

bsmith89
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ricardoV94
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Drop redundant initialization test for DM.

bsmith89
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ricardoV94
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Add test that DM is normalized for n=1 case.

bsmith89
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ricardoV94
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Add DM test case based on BetaBinomial.

bsmith89
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ricardoV94
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Update pymc3/distributions/multivariate.py

ColCarroll
authored and
ricardoV94
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- Infer shape by default (copied code from Dirichlet Distribution)
ricardoV94
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- Use size information in random method
ricardoV94
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- Restore merge accidental deletions
ricardoV94
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- Underscore missing
ricardoV94
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- More merge cleaning
ricardoV94
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Bring DirichletMultinomial initialization into alignment with Multinomial.

bsmith89
authored and
ricardoV94
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Align all DM tests with Multinomial.

bsmith89
authored and
ricardoV94
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Align DirichletMultinomial random implementation with Multinomial.

bsmith89
authored and
ricardoV94
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Match DM random method to Multinomial implementation.

bsmith89
authored and
ricardoV94
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Change alpha -> a
ricardoV94
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Run pre-commit
ricardoV94
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Keep standard order of methods random and logp
ricardoV94
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Update docstrings for valid input types.
ricardoV94
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Add new test to ensure DM matches BetaBinom
ricardoV94
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Change DM alpha -> a in docstrings.
bsmith89
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Test two additional parameterization shapes in `test_dirichlet_multinomial_random`.
bsmith89
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Revert debugging comments.
bsmith89
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Revert unrelated changes.
bsmith89
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Fix minor Black inconsistency.
bsmith89
committed

Commits on Jan 10, 2021

Commits on Jan 14, 2021

Commits on Jan 15, 2021

Commits on Jan 16, 2021

Add DM to multivariate distributions docs.
bsmith89
committed