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spatialdata_io.steinbock anndata<0.12 dependency

Status: Open.

#329 In scverse/spatialdata-io;

· danielStrobl opened on Oct 7, 2025

Xenium read error

Status: Open.

#325 In scverse/spatialdata-io;

· SirKuikka opened on Sep 17, 2025

Add support for Space Ranger cell segmentation data

Status: Open.

#323 In scverse/spatialdata-io;

· asmlgkj opened on Sep 13, 2025

How to read BGI's STOmics spatial transcriptomics data?

Status: Open.

#322 In scverse/spatialdata-io;

· timtreis opened on Sep 7, 2025

Recommended approach for reading multiple Xenium slides with mutual panel at once

Status: Open.

#319 In scverse/spatialdata-io;

· matt-sd-watson opened on Sep 2, 2025

ENHANCEMENT: to_legacy_anndata support with region > 1

Status: Open.

#318 In scverse/spatialdata-io;

· gboscagli opened on Sep 1, 2025

Reader does not support cell segmentation of visium hd got after using latest spaceranger version 4

Status: Open.

#317 In scverse/spatialdata-io;

· rahmaqadeer opened on Aug 22, 2025

Cosmx reader: CellOverlay is skipped

Status: Open.

#313 In scverse/spatialdata-io;

· StevenWijnen opened on Aug 11, 2025

<code>xenium_aligned_image</code> assumes the image has 3 or 4 channels

Status: Open.

#311 In scverse/spatialdata-io;

· quentinblampey opened on Jul 31, 2025

Reading segmented data with Visium_HD (spaceranger&gt;4)

Status: Open.

#310 In scverse/spatialdata-io;

· ddiez opened on Jul 3, 2025

Unable to read xenium data

Status: Open.

#309 In scverse/spatialdata-io;

· RiyaPodder opened on Jun 30, 2025

<code>xenium</code> fails on imported segmentation

Status: Open.

#308 In scverse/spatialdata-io;

· dcjones opened on Jun 17, 2025