Skip to content

Cannot link biosample to sra #107

@stitam

Description

@stitam

This works (although the result is NA)

webseq::ncbi_link_uid(webseq::ncbi_get_uid("SAMN02714232", db = "biosample"), 
    to = "sra")
#> # A tibble: 1 × 2
#>   biosample   sra
#>       <dbl> <dbl>
#> 1   2714232    NA

Created on 2025-11-21 with reprex v2.1.1

This doesn't work:

webseq::ncbi_link("SAMN02714232", from = "biosample", to = "sra")
#> Error in x$uid: $ operator is invalid for atomic vectors

Created on 2025-11-21 with reprex v2.1.1

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions