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  1. tn5_atac_bias_correction tn5_atac_bias_correction Public

    Code and models used in Viswanadham et al 2019 "A Bayesian approach for correcting Tn5 transposition bias in ATAC-seq footprinting"

    R 1

  2. dndscv dndscv Public

    Forked from im3sanger/dndscv

    dN/dS methods to quantify selection in cancer and somatic evolution

    R

  3. leafcutter leafcutter Public

    Forked from davidaknowles/leafcutter

    Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard

    R

  4. vinayakvsv.github.io vinayakvsv.github.io Public

    HTML

  5. parklab/mutagenesis_tools parklab/mutagenesis_tools Public

    Scripts for simulating mutant peptides and reading frames from mutations

    Python 1