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Copy functions #217

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Merged
merged 25 commits into from
Jan 2, 2018
Merged

Copy functions #217

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f23d29e
test and implement copy_store
alimanfoo Dec 8, 2017
187fee6
add excludes/includes
alimanfoo Dec 8, 2017
afd2eef
document copy_store
alimanfoo Dec 8, 2017
83e1616
wip
alimanfoo Dec 8, 2017
85859d6
implement copy functions
alimanfoo Dec 8, 2017
56cafc3
add logging to examples
alimanfoo Dec 8, 2017
5fb4829
tweak example
alimanfoo Dec 9, 2017
7a95150
edit docs
alimanfoo Dec 9, 2017
1c2ad4f
add test
alimanfoo Dec 9, 2017
fb64e9b
add h5py to dev requirements
alimanfoo Dec 9, 2017
f46bb1c
flake8 [ci skip]
alimanfoo Dec 9, 2017
fd8d96a
refactor tests; add overwrite option
alimanfoo Dec 10, 2017
6002b0f
copy chunk by chunk
alimanfoo Dec 10, 2017
c51672f
tweak error message
alimanfoo Dec 10, 2017
9f2fb20
rework copy_store to use if_exists/dry_run parameters
alimanfoo Dec 10, 2017
f777b90
rework copy to use if_exists/dry_run parameters
alimanfoo Dec 11, 2017
6e7cb4e
refactor copy tests; coverage up
alimanfoo Dec 11, 2017
fd1e5df
simplify returns
alimanfoo Dec 11, 2017
7d3b38c
windows and py2 compat
alimanfoo Dec 11, 2017
95372cc
preserve filters, order, fill_value on copy zarr-to-zarr
alimanfoo Dec 22, 2017
a32f33f
check dest is group
alimanfoo Dec 23, 2017
82160a6
clean up h5 files
alimanfoo Dec 23, 2017
f6614b0
document copy functions
alimanfoo Dec 23, 2017
f284794
fix tutorial copyall -> copy_all [ci skip]
alimanfoo Jan 2, 2018
a33a46a
fix error message; comments [ci skip]
alimanfoo Jan 2, 2018
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4 changes: 4 additions & 0 deletions docs/api/convenience.rst
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Expand Up @@ -6,3 +6,7 @@ Convenience functions (``zarr.convenience``)
.. autofunction:: load
.. autofunction:: save_array
.. autofunction:: save_group
.. autofunction:: copy
.. autofunction:: copy_all
.. autofunction:: copy_store
.. autofunction:: tree
1 change: 1 addition & 0 deletions requirements_dev.txt
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Expand Up @@ -10,6 +10,7 @@ Cython==0.27.2
docopt==0.6.2
fasteners==0.14.1
flake8==3.5.0
h5py==2.7.1
idna==2.6
mccabe==0.6.1
monotonic==1.3
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3 changes: 2 additions & 1 deletion zarr/__init__.py
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Expand Up @@ -11,5 +11,6 @@
from zarr.hierarchy import group, open_group, Group
from zarr.sync import ThreadSynchronizer, ProcessSynchronizer
from zarr.codecs import *
from zarr.convenience import open, save, save_array, save_group, load
from zarr.convenience import (open, save, save_array, save_group, load, copy_store,
copy, copy_all, tree)
from zarr.version import version as __version__
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