chore(deps-dev): bump the python-dependencies group with 5 updates

[dependabot]

Bumps the python-dependencies group with 5 updates:

Package	From	To
fsspec	2026.6.0	2026.7.0
hypothesis	6.160.0	6.163.0
uv	0.11.31	0.12.0
s3fs	2026.6.0	2026.7.0
ruff	0.15.22	0.16.0

Updates fsspec from 2026.6.0 to 2026.7.0

Commits

• 9e22b60 Changelog (#2089)
• 33e6da3 Shut down background cache workers on file close (#2069)
• 4adecd3 tar: make members with duplicate slashes reachable via ls/find/glob (#1947) (...
• 59f98d7 Forward ls kwargs from cached filesystems (#2068)
• 5e266e0 Single-pass MemoryFileSystem.find() to avoid quadratic listing (#2055)
• 19a042b replay DEP: de-duplicate and sort optional dependencies (#2021) (#2031)
• fec09b0 Propagate storage_options to all backends resolved by GenericFileSystem (#185...
• dee64db fixes for deprecation: https://docs.pytest.org/en/stable/deprecations.html#cl...
• 7a9b98b Permit composite URI protocol schemes in infer_storage_options (#2085)
• 901282c Fix incorrect glob docstring for '[!]' (empty negated class) (#2084)
• Additional commits viewable in compare view

Updates hypothesis from 6.160.0 to 6.163.0

Commits

• 793e92d Bump hypothesis version to 6.163.0 and update changelog
• ba2899b Merge pull request #4830 from Liam-DeVoe/from-regex-alphabet-collections
• 5e3cae2 Bump hypothesis version to 6.162.0 and update changelog
• d92a798 Merge pull request #4811 from Zac-HD/claude/sleepy-keller-o5cUK
• f5e473a claude: support Collection[str] alphabet in from_regex, unify alphabet valida...
• cbf124b Skip non-ns dtype construction at import on pandas < 2
• 8d0a004 Address review: constrain constant-offset range, simplify tz classification
• 8852abe add new test
• 72d88bd simplify tests
• 0addb38 Support timezone-aware datetime dtypes in hypothesis.extra.pandas
• Additional commits viewable in compare view

Updates uv from 0.11.31 to 0.12.0

Release notes

Sourced from uv's releases.

0.12.0

Release Notes

Released on 2026-07-28.

Since we released uv 0.11.0 in March, we've accumulated changes that improve correctness, safety, and compatibility with specifications, but could break some workflows. This release contains those changes; many have been marked as breaking out of an abundance of caution.

We expect most users to be able to upgrade without making changes.

There are no breaking changes to the configuration of the uv build backend. If your [build-system] table includes an upper bound on uv_build, update it to allow uv_build 0.12, e.g., uv_build>=0.11.32,<0.13.

Breaking changes

• Define build systems by default with uv init (#19197)

  Projects created with uv init now declare a build system and are packaged by default. This was the default project layout all the way back in v0.3, but we found that the use of the hatchling build system was confusing to newcomers and consequently dropped use of a build system by default in v0.4. Since then, we've created our own build system (uv_build) with tight integration with uv and are excited to restore the default to a best-practice project layout.

  Previously, uv init example created an unpackaged layout containing main.py and a pyproject.toml without a build system. The project could declare dependencies but was not itself installed into its virtual environment.

  Now, uv init example defines a [build-system] using uv_build, places application source code in src/example, and includes a [project.scripts] entry named example. Defining a build system allows the project to be imported from tests or other code, installed as a dependency, and run as a command:

  $ uv init example
  $ cd example
  $ uv run example
  Hello from example!

  Existing projects are unaffected. Use uv init --no-package example to create the previous unpackaged layout without a build system.

  See the project creation documentation for more details.

  This stabilizes the packaged-init preview feature.

• Reject unsupported source distribution and wheel archive formats (#18927)

  PEP 625 requires source distributions to use .tar.gz archives. Previously, uv also accepted legacy formats such as .tar.bz2 and .tar.xz. Those formats are now rejected, including when referenced by an existing lockfile. Legacy .zip source distributions remain supported for backwards compatibility.

  Wheels and other ZIP archives can no longer contain entries compressed with bzip2, LZMA, or XZ. Entries must use the stored, DEFLATE, or zstd compression methods.

  Removing support for uncommon compression methods reduces uv's compression dependencies and the attack surface exposed when processing untrusted packages.

  You cannot opt out of this behavior. If you depend on a legacy source distribution that uses an unsupported format, we recommend rebuilding it as a .tar.gz archive and regenerating any lockfile containing references to the legacy archive.

• Reject wheel files that could replace the Python interpreter (#20748, #20749)

  uv already rejected wheel entry points named python, but case variants such as Python were still accepted. On case-insensitive filesystems, including common macOS and Windows setups, these entry points could overwrite the virtual environment's interpreter.

  Wheels could also place interpreter files in their .data/scripts directory or in paths such as .data/data/bin/python, bypassing the entry-point check and replacing the interpreter during installation.

... (truncated)

Changelog

Sourced from uv's changelog.

0.12.0

Released on 2026-07-28.

Since we released uv 0.11.0 in March, we've accumulated changes that improve correctness, safety, and compatibility with specifications, but could break some workflows. This release contains those changes; many have been marked as breaking out of an abundance of caution.

We expect most users to be able to upgrade without making changes.

There are no breaking changes to the configuration of the uv build backend. If your [build-system] table includes an upper bound on uv_build, update it to allow uv_build 0.12, e.g., uv_build>=0.11.32,<0.13.

Breaking changes

• Define build systems by default with uv init (#19197)

  Projects created with uv init now declare a build system and are packaged by default. This was the default project layout all the way back in v0.3, but we found that the use of the hatchling build system was confusing to newcomers and consequently dropped use of a build system by default in v0.4. Since then, we've created our own build system (uv_build) with tight integration with uv and are excited to restore the default to a best-practice project layout.

  Previously, uv init example created an unpackaged layout containing main.py and a pyproject.toml without a build system. The project could declare dependencies but was not itself installed into its virtual environment.

  Now, uv init example defines a [build-system] using uv_build, places application source code in src/example, and includes a [project.scripts] entry named example. Defining a build system allows the project to be imported from tests or other code, installed as a dependency, and run as a command:

  $ uv init example
  $ cd example
  $ uv run example
  Hello from example!

  Existing projects are unaffected. Use uv init --no-package example to create the previous unpackaged layout without a build system.

  See the project creation documentation for more details.

  This stabilizes the packaged-init preview feature.

• Reject unsupported source distribution and wheel archive formats (#18927)

  PEP 625 requires source distributions to use .tar.gz archives. Previously, uv also accepted legacy formats such as .tar.bz2 and .tar.xz. Those formats are now rejected, including when referenced by an existing lockfile. Legacy .zip source distributions remain supported for backwards compatibility.

  Wheels and other ZIP archives can no longer contain entries compressed with bzip2, LZMA, or XZ. Entries must use the stored, DEFLATE, or zstd compression methods.

  Removing support for uncommon compression methods reduces uv's compression dependencies and the attack surface exposed when processing untrusted packages.

  You cannot opt out of this behavior. If you depend on a legacy source distribution that uses an unsupported format, we recommend rebuilding it as a .tar.gz archive and regenerating any lockfile containing references to the legacy archive.

• Reject wheel files that could replace the Python interpreter (#20748, #20749)

  uv already rejected wheel entry points named python, but case variants such as Python were still accepted. On case-insensitive filesystems, including common macOS and Windows setups, these entry points could overwrite the virtual environment's interpreter.

  Wheels could also place interpreter files in their .data/scripts directory or in paths such as .data/data/bin/python, bypassing the entry-point check and replacing the interpreter during installation.

  uv now rejects case-insensitive variants of reserved interpreter names and wheel data files that would be installed over an interpreter. This includes names such as Python, python.py, and Python.exe, along with other reserved interpreter names and their versioned variants.

  You cannot opt out of these checks. Rename conflicting entry points or wheel data files and rebuild the affected wheel.

... (truncated)

Commits

• b88d7c5 Archive the 0.11.x changelog (#20777)
• faff952 Update Rust crate jiff to v0.2.34 (#20710)
• 4c28d9c Keep changelog paragraphs on single lines (#20778)
• 43a1288 Bump version to 0.12.0 (#20775)
• 8fe5f80 Sync latest Python releases (#20682)
• b187a51 Honor certificate overrides when running remote scripts (#20767)
• 6e79013 Package explicitly requested applications by default (#20773)
• e4602de Reject broken .venv symlinks and surface metadata errors (#20433)
• 9391f97 Reject multi-dot pylock filenames (#20440)
• 06bba12 Honor explicit certificate sources even when empty (#20741)
• Additional commits viewable in compare view

Updates s3fs from 2026.6.0 to 2026.7.0

Commits

• See full diff in compare view

Updates ruff from 0.15.22 to 0.16.0

Release notes

Sourced from ruff's releases.

0.16.0

Release Notes

Released on 2026-07-23.

Check out the blog post for a migration guide and overview of the changes!

Breaking changes

• Ruff now enables a much larger set of rules by default (413, up from 59). See the blog post for more details and the new Default Rules page for a full listing of the enabled rules. Note that this is primarily an expansion, but 18 of the more opinionated pycodestyle (E) and pyflakes (F) rules have been removed from the default set: E401, E402, E701, E702, E703, E711, E712, E713, E714, E721, E731, E741, E742, E743, F403, F405, F406, and F722.

• Ruff can now format Python code blocks in Markdown files and will do this by default. See the documentation for more details.

• Ruff now supports ruff: ignore comments at the ends of lines, like noqa comments, or on the line preceding a diagnostic. For example, these both suppress an unused-import (F401) diagnostic:

  import math  # ruff: ignore[F401]
  ruff: ignore[F401]
  import os

• Fixes are now shown in check and format --check output:

  ❯ ruff format --check .
  unformatted: File would be reformatted
   --> try.md:1:1
    |
  1 | ```python
    - import   math
  2 + import math
  3 | ```
    |
  1 file would be reformatted

  This example also shows off the Markdown formatting.

• format --check now supports the same output formats as the linter, including the github and gitlab outputs for rendering annotations in CI:

  ❯ ruff format --check --output-format github .
  ::error title=ruff (unformatted),file=try.md,line=2,col=8,endLine=2,endColumn=10::try.md:2:8: unformatted: File would be reformatted

  See the CLI help or documentation for the full list of supported formats.

• The filename, location, end_location, fix.edits[].location, and fix.edits[].end_location fields in the JSON output format may now be null rather than defaulting to the empty string and row 1, column 1, respectively.

... (truncated)

Changelog

Sourced from ruff's changelog.

0.16.0

Released on 2026-07-23.

Check out the blog post for a migration guide and overview of the changes!

Breaking changes

• Ruff now enables a much larger set of rules by default (413, up from 59). See the blog post for more details and the new Default Rules page for a full listing of the enabled rules. Note that this is primarily an expansion, but 18 of the more opinionated pycodestyle (E) and pyflakes (F) rules have been removed from the default set: E401, E402, E701, E702, E703, E711, E712, E713, E714, E721, E731, E741, E742, E743, F403, F405, F406, and F722.

• Ruff can now format Python code blocks in Markdown files and will do this by default. See the documentation for more details.

• Ruff now supports ruff: ignore comments at the ends of lines, like noqa comments, or on the line preceding a diagnostic. For example, these both suppress an unused-import (F401) diagnostic:

  import math  # ruff: ignore[F401]
  ruff: ignore[F401]
  import os

• Fixes are now shown in check and format --check output:

  ❯ ruff format --check .
  unformatted: File would be reformatted
   --> try.md:1:1
    |
  1 | ```python
    - import   math
  2 + import math
  3 | ```
    |
  1 file would be reformatted

  This example also shows off the Markdown formatting.

• format --check now supports the same output formats as the linter, including the github and gitlab outputs for rendering annotations in CI:

... (truncated)

Commits

• a2635fd Bump 0.16.0 (#27136)
• 3433449 [ty] Reuse full call diagnostics for implicit setter calls (#27115)
• 2240070 Reflect ruff: ignore and --add-ignore stabilization in documentation (#27...
• 17ef711 Stabilize --add-ignore (#27125)
• ef912bb Add newly stabilized rules to defaults (#27055)
• b30f040 Stabilize new default rules (#27035)
• bcd70c5 Exclude Markdown files from format-dev runs (#27052)
• 87e51e2 Fix format --check spans for syntax errors (#27045)
• afe2723 [flake8-gettext] Stabilize qualified-name and built-in binding resolution (...
• a9702d8 [flake8-bandit] Stabilize string literal binding resolution (S310) (#26944)
• Additional commits viewable in compare view

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