test: VC-2362 model regression tests #1

	name: Model Regression Tests

	on:
	pull_request:
	branches: [ main ]
	push:
	branches: [ main ]
	workflow_dispatch:
	inputs:
	model:
	description: 'Model to test'
	required: true
	type: choice
	default: 'all'
	options:
	- all
	- SCGPT
	- SCVI
	- GENEFORMER
	- SCGENEPT
	- UCE
	- TRANSCRIPTFORMER
	mock_container:
	description: 'Whether to mock the container runner'
	required: true
	type: boolean
	default: true

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	permissions:
	contents: read
	pull-requests: read

	jobs:
	model_regression:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4

	- name: Install OpenMP
	run: sudo apt-get update && sudo apt-get install -y libomp-dev

	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: '3.11'

	- name: Install uv
	run: \|
	curl -LsSf https://astral.sh/uv/install.sh \| sh
	echo "$HOME/.cargo/bin" >> $GITHUB_PATH

	- name: Install dependencies
	run: \|
	uv venv
	source .venv/bin/activate
	uv pip install -e ".[dev]"

	- name: Run model regression test
	run: \|
	source .venv/bin/activate
	if [ "${{ github.event.inputs.model }}" = "all" ]; then
	pytest "tests/models/test_cli_model_regression.py" -vv -s ${{ github.event.inputs.mock_container && '--mock-container-runner' \|\| '' }}
	else
	pytest "tests/models/test_cli_model_regression.py::test_model_regression[${{ github.event.inputs.model }}-human-human_spermatogenesis-clustering]" -vv -s ${{ github.event.inputs.mock_container && '--mock-container-runner' \|\| '' }}

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