Skip to content

Coordinate system inconsistency in Visium HD data #295

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
quentinblampey opened this issue Mar 25, 2025 · 1 comment
Closed

Coordinate system inconsistency in Visium HD data #295

quentinblampey opened this issue Mar 25, 2025 · 1 comment

Comments

@quentinblampey
Copy link
Contributor

Since #278, the Visium HD reader uses the dataset id to name the coordinate systems, but not for all images.
This creates issues as the fullres image is still in the global coordinate system, while the other images have no transformation to it.

PR: #294

@quentinblampey
Copy link
Contributor Author

Fixed in #303

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant